CK740134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_SYNS9 (50S ribosomal protein L14 OS=Synechococcus sp. (strain CC9902) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 423 Q + + ADN+GAK + I V G R A VGD+++A VK P++ K V+ AV+VR + RR+ G + F+DNA VI+N KG+ + GP+ +E + + +I S A ++ Sbjct: 3 QQESFLTVADNSGAKRIQCIRVLGTNRRY-----AHVGDVIVAAVKDAMPNMGVKKSDVVKAVVVRTKATLRRETGNSIRFDDNAAVIINDDKNPKGTRVFGPVARELRERSFTKIVSLAPEVI 121
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PROMT (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain NATL2A) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 ADN+GAK L I V G R A VGD+++A+VK P++ K V+ AV+VR R RR+ G + F+DNA V++N +G+ + GP+ +E + + +I S A ++ Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVASVKDAMPNMGVKKSDVVKAVVVRTRATMRRETGNSIRFDDNAAVLINDDQNPRGTRVFGPVARELRERNFTKIVSLAPEVI 121
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PROM1 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain NATL1A) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 ADN+GAK L I V G R A VGD+++A+VK P++ K V+ AV+VR R RR+ G + F+DNA V++N +G+ + GP+ +E + + +I S A ++ Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVASVKDAMPNMGVKKSDVVKAVVVRTRATMRRETGNSIRFDDNAAVLINDDQNPRGTRVFGPVARELRERNFTKIVSLAPEVI 121
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_LACPL (50S ribosomal protein L14 OS=Lactobacillus plantarum GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q + + ADN+GA+ + I V G GR +A +GD+++ATVK+ P K V+ AVIVR + R DG ++ F++NA VI+ +G+ I GP+ +E D + RI S A ++ Sbjct: 3 QQESRLKVADNSGAREILTIKVLGGSGR----KTANIGDVIVATVKQATPGGVVKAHDVVKAVIVRTKSGVHRADGSYIKFDENAAVIIRDDKTPQGTRIFGPVARELRDKDFMRIVSLAPEVL 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_DESRM (50S ribosomal protein L14 OS=Desulfotomaculum reducens (strain MI-1) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q + ADNTGA+ L I V G G L R S VGD+++A+VK+ P + V+ V+VR K RR DG ++ F++NA V++ +G+ I GP+ +E + + +I S A ++ Sbjct: 3 QVQTILKAADNTGARKLMCIRVMG--GSLRRYAS--VGDIIVASVKEATPGGVVKKGDVVKCVVVRTSKEVRRPDGSYIKFDENAAVVIKDDKTPRGTRIFGPVARELREKDFMKIVSLAPEVI 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CLOD6 (50S ribosomal protein L14 OS=Clostridium difficile (strain 630) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADN+GAK L I V G G R + +GD+++ATVK P + KV+ AVIVR ++ RR DG ++ F++NA VI+ G+ I GP+ +E D Sbjct: 3 QQESRLRVADNSGAKELLCIRVLG--GSKRRYGN--IGDVIVATVKSATPGGVVKKGKVVKAVIVRSKQGVRRNDGSYISFDENAAVIIKDDKTPVGTRIFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CLOCE (50S ribosomal protein L14 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 375 Q Q + ADNTGAK L I V G R A +GD+V+A+VK P + V+ VIVR +K RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 3 QVQSRMKVADNTGAKELMCIKVLGGSWR----KYANIGDVVVASVKNATPGGVVKKGDVVKCVIVRSKKGVRRPDGSYIRFDENAAVIIKDDKNPRGTRIFGPVARE 105
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CHLAD (50S ribosomal protein L14 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 423 Q Q + ADNTGAK + I V G +R+ VGD+++A+VK+ P + K V+ AVI+R K + R DG + F+DNA V++ + +G+ I GP+ +E + + RI S A ++ Sbjct: 3 QPQTRLKVADNTGAKEIMCIRVLGG----SRVRYGRVGDIIVASVKEATPGGQVKKGDVVKAVIIRTAKEYGRPDGSHIRFDDNAAVLIGKENNPRGTRIFGPVARELREKQFMRIVSLAPEVL 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_BACP2 (50S ribosomal protein L14 OS=Bacillus pumilus (strain SAFR-032) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADN+GA+ + I V G GR +A +GD+++ TVK+ P + +V+ AVIVR + RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 3 QQETRLKVADNSGAREVLTIKVLGGSGR----KTANIGDVIVCTVKQATPGGVVKKGEVVKAVIVRTKSGARRNDGSYISFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_ANOFW (50S ribosomal protein L14 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q + + ADN+GA+ + +I V G GR A +GD+V+ATVK P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E + + +I S A ++ Sbjct: 3 QQETRMKVADNSGAREVLVIKVLGGSGRRY----ANIGDIVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRTDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELREKDFMKIVSLAPEVI 122 The following BLAST results are available for this feature:
BLAST of CK740134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740134 ID=CK740134; Name=CK740134; organism=Citrus sinensis; type=EST; length=596bpback to top |