CK740134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27 Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 30 ADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVRIGSIASIIV 141
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27 Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 30 ADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27 Identity = 58/115 (50.43%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 + C DNTGA+ + IISVK +G NR+P +GDM + +VKKG P++RK+++ AVIVRQ+K +RR DG+ + FEDNA VIV+ KG KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 18 IECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAERFPKIGTTASMIV 132
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.146e-27 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 18 ITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.146e-27 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 18 ITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.048e-26 Identity = 60/112 (53.57%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 ADN+GAK + II V G KG RL +A VGDMV+ATVKKG+PD+R +V+ AV+VRQRK +RR DG+ + FEDNA IV P+G +G+ I G I +E A+ W R+ S A+ ++ Sbjct: 30 ADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL 141
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 CADN+GAK L +I+V + R +RLPSA VGD VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V++ P+GE KG+ I GP+ E ++ WPR+A+ A+ +V Sbjct: 28 CADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLASMVV 140
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26 Identity = 56/117 (47.86%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 VN ADN+GAK + +I V G K R+P VGDMV+ +V++GKP++RK+++ A++VRQR+P+RR DG ++ FEDNA VIV +G++KG+ + GP+ E A WP++AS A I+ Sbjct: 28 VNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRWPQVASIATMII 144
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 59/115 (51.30%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 V C DNTGAK + IISVK +G NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GPI +E A+ +P+I + A+ IV Sbjct: 18 VPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.796e-26 Identity = 57/115 (49.57%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423 + C DNTGAK + IISVK +G NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 18 IACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132 The following BLAST results are available for this feature:
BLAST of CK740134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740134 ID=CK740134; Name=CK740134; organism=Citrus sinensis; type=EST; length=596bpback to top |