CK740134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CLAMS (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=rplN PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADNTGAK + I V G GR A +GD+++ATVK P +++K +V+ AVIVR +K RR DG ++ F++NA VI+N GE +G+ I GP+G+E D Sbjct: 3 QQESRLKIADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVGRELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CLAM3 (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=rplN PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADNTGAK + I V G GR A +GD+++ATVK P +++K +V+ AVIVR +K RR DG ++ F++NA VI+N GE +G+ I GP+G+E D Sbjct: 3 QQESRLKIADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVGRELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_ZYGCR (50S ribosomal protein L14, chloroplastic OS=Zygnema circumcarinatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q +N ADN+GA+ L I V G R A +GDMV+A VK+ P++ + +++ AVIVR RK +R +G+ + F+DNA V++N +G +G+ + GP+ +E DL + +I S A ++ Sbjct: 3 QPQSYLNVADNSGARKLMCIRVLGSSNR----KYAHIGDMVIAVVKETVPNMPLKKSEIVRAVIVRTRKGLKRDNGMVLRFDDNAAVVINQEGNPRGTRVFGPVARELRDLNFTKIVSLAPEVL 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_STIHE (50S ribosomal protein L14, chloroplastic OS=Stigeoclonium helveticum GN=rpl14 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 45/109 (41.28%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 70 QQPVNCADNTGAKNLYIISVKG-IKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q +N ADNTGA+ + I V G I+G+ +A +GD+++A VK P+ K ++ AV+VR RK RR++G+F+ FEDNA V++N +G +G+ I GP+ +E D Sbjct: 5 QSYLNVADNTGARKVMCIRVLGGIQGQ-----TANIGDVIIAVVKDALPNTGVKKSDIVRAVVVRTRKGIRRENGMFIRFEDNAAVVINKEGNPRGTRIFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_MICLU (50S ribosomal protein L14 OS=Micrococcus luteus GN=rplN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 423 Q + + ADNTGAK + I V G GR A +GD ++ATVK P K V+ AV+VR RK RR DG ++ F++NA VI+ GE +G+ I GP+G+E D + +I S A ++ Sbjct: 3 QQESRLKVADNTGAKEILTIRVLGGSGRRY----AGIGDTIVATVKDAIPGGNVKKAHVVKAVVVRTRKQSRRPDGSYIKFDENAAVILKTDGEPRGTRIFGPVGRELRDKKFMKIVSLAPEVI 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_MICLC (50S ribosomal protein L14 OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=rplN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 423 Q + + ADNTGAK + I V G GR A +GD ++ATVK P K V+ AV+VR RK RR DG ++ F++NA VI+ GE +G+ I GP+G+E D + +I S A ++ Sbjct: 3 QQESRLKVADNTGAKEILTIRVLGGSGRRY----AGIGDTIVATVKDAIPGGNVKKGDVVKAVVVRTRKQSRRPDGSYIKFDENAAVILKTDGEPRGTRIFGPVGRELRDKKFMKIVSLAPEVI 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CYAP4 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + +N ADN+GAK L I V G G R S VGD+++ATVK P++ K V+ AVIVR RK RR+ G+ + F+DNA V++N G KG+ + GP+ +E D Sbjct: 3 QQESYLNVADNSGAKKLLCIRVLG--GGNRRYGS--VGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKAIRRESGMSIRFDDNAAVLINQDGNPKGTRVFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CHLT3 (50S ribosomal protein L14 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplN PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 423 ADN+GAK + I V G GR A +GDM++ +VK P +K V AV+VR +K +RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D + +I S A ++ Sbjct: 11 ADNSGAKRVRCIHVLGGTGRRY----ATIGDMIVVSVKSAIPGGAVKKKDVSKAVVVRTKKEYRRKDGSYIRFDENAVVLLNTQGEPRGTRIFGPVARELRDKQYMKIISLAPEVI 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_THEEB (50S ribosomal protein L14 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplN PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + +N ADN+GAK L I V G G R S VGD+++ATVK P++ K V+ AVIVR RK RR+ G+ + F+DNA V++N G +G+ + GP+ +E D Sbjct: 3 QQETYLNVADNSGAKKLLCIRVLG--GSNRRYGS--VGDVIIATVKDATPNMAVKKSDVVRAVIVRTRKSIRRESGMSIRFDDNAAVLINQDGNPRGTRVFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_LEIXX (50S ribosomal protein L14 OS=Leifsonia xyli subsp. xyli GN=rplN PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADNTGAK L I V G GR A +GD+++ATVK P K V+ AVIVR RK RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 3 QQESRLKVADNTGAKELLTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGDVVKAVIVRTRKNTRRTDGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108 The following BLAST results are available for this feature:
BLAST of CK740134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740134 ID=CK740134; Name=CK740134; organism=Citrus sinensis; type=EST; length=596bpback to top |