CK740151

Overview
NameCK740151
Unique NameCK740151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX41_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4)

HSP 1 Score: 126.716 bits (317), Expect = 3.839e-29
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +  +F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+KFL+DK G  V+RY P   P  IEKD+
Sbjct:   76 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKDL 193          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX42_RAT (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Rattus norvegicus GN=Gpx4 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 5.014e-29
Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +   F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+KFL+DK G  V+RY P   P  IEKD+
Sbjct:  132 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKDL 249          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX41_RAT (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 5.014e-29
Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +   F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+KFL+DK G  V+RY P   P  IEKD+
Sbjct:   76 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKDL 193          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 6.549e-29
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +  +F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+KFL+DK G  V+RY P   P  IE+D+
Sbjct:  132 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCEVKRYGPMEEPQVIERDL 249          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 1.905e-28
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            T  NYT+L  L+ +Y   GL ILAFPCNQFG QEPG + +I+EFA   +  +F +F K+ VNGD+A PL+K +K   KG G+ G++IKWNF+KFL+DK G  V+RY P   P  IEKD+
Sbjct:   76 TEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKDL 193          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX1_SCHPO (Glutathione peroxidase OS=Schizosaccharomyces pombe GN=gpx1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.489e-28
Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            Y  L  LY KYK++G  IL FPCNQFG QEPG +E+I +F    +   FP+  K++VNGDN  P+Y+ LKS K  L  + IKWNF KFLV+++G  +ERY+  + P  +E DI+ +L
Sbjct:   42 YKGLEALYQKYKDRGFIILGFPCNQFGNQEPGSDEEIAQFCQKNYGVTFPVLAKINVNGDNVDPVYQFLKSQKKQLGLERIKWNFEKFLVNRQGQVIERYSSISKPEHLENDIESVL 158          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.544e-28
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 2
Query:   23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            L +LYD+YK+Q   IL FPCNQFG QEPG  E+  +     +   FPI +KVDV GDN  PL+  L ++  G+  + IKWNF+KFL+D+EGN ++R++P   P  I+ +I+KLL
Sbjct:   45 LQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEEAAQNCKINYGVTFPIHEKVDVKGDNQHPLFHFLTNAAKGMINEKIKWNFTKFLIDREGNVIKRFSPQKKPEQIKTEIEKLL 158          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: BSAA_STAEQ (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.693e-27
Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 2
Query:    5 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLLE 367
            N  + +L  LY KY   GLEIL+FPCN F  QEPG  + I      +F   FPI  K++VNG++  PLY  LK  + GLFG  IKWNF+KF+VD++GN V+R+ P  +P  +EK I++LL+
Sbjct:   38 NDQFNKLEMLYKKYHKYGLEILSFPCNDFNNQEPGLIKDIYRVYKYKFGITFPIHAKINVNGEHEHPLYTLLKCKQPGLFGSQIKWNFTKFVVDQQGNIVKRFLPCDNPNQMEKLIRQLLK 158          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPO_SYNY3 (Putative glutathione peroxidase OS=Synechocystis sp. (strain PCC 6803) GN=slr1171 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 6.130e-27
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLF------GDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            Y  L  LY+++ ++G  +L FPCNQFG QEPG + +I+ F  TR+   FP+F+KV+VNG NA PL+K L ++  G+        + IKWNF+KFLVD++G  V+RY     P  I  DI+KLL
Sbjct:   47 YQGLQALYNRFGDRGFTVLGFPCNQFGQQEPGGSGEIKNFCETRYGVTFPLFEKVEVNGPNAHPLFKFLTAASPGMAIPFLGGAEDIKWNFTKFLVDRQGKVVKRYGSIAKPDEIAADIEKLL 169          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX1_CHLRE (Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.575e-25
Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR--FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLLET 370
            T +NY E + L  KY    L I+AFPCNQFG QEPG N +I+ FA  R    A   + DKVDVNG NA+P+Y  LK + G      I WNF KFLV  +G    RYAPTT PLS+EK I +L+ +
Sbjct:   78 TAANYKEFATLLGKYPATDLTIVAFPCNQFGGQEPGTNAEIKAFASARGFSGAGALLMDKVDVNGANASPVYNFLKVAAGDT--SDIGWNFGKFLVRPDGTVFGRYAPTTGPLSLEKYIVELINS 200          
The following BLAST results are available for this feature:
BLAST of CK740151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
GPX41_MOUSE3.839e-2952.94Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX42_RAT5.014e-2952.94Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX41_RAT5.014e-2952.94Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX42_MOUSE6.549e-2952.10Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_PIG1.905e-2852.94Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX1_SCHPO2.489e-2848.72Glutathione peroxidase OS=Schizosaccharomyces pomb... [more]
BSAA_STAES5.544e-2848.25Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAEQ4.693e-2747.93Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPO_SYNY36.130e-2746.34Putative glutathione peroxidase OS=Synechocystis s... [more]
GPX1_CHLRE2.575e-2550.40Glutathione peroxidase 1, mitochondrial OS=Chlamyd... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6645 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740151 ID=CK740151; Name=CK740151; organism=Citrus sinensis; type=EST; length=432bp
GACCAATTCAAACTACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGA
ATCAAGGCTTGGAGATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAA
GAGCCAGGAGACAATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAA
GGCTGAGTTTCCCATATTTGATAAGGTTGATGTTAATGGTGATAATGCTG
CTCCTTTATACAAGCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGAC
AGCATCAAGTGGAACTTTTCCAAGTTCTTGGTGGATAAGGAGGGGAATGG
TGTTGAGCGTTATGCCCCCACCACTAGCCCTCTGAGCATTGAGAAGGATA
TAAAGAAACTTCTGGAGACTGCTTAACCGCTGCTACAGCTTGCATGATCA
GCTTCTTGCTAATAAAACTAGAGTATCATGCT
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