CK740151

Overview
NameCK740151
Unique NameCK740151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX5_HUMAN (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFG------------DSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLLE 367
            + Y EL+ L ++ K  GL +L FPCNQFG QEPGDN++I       R    F   F +F+K DVNG+    ++  LK S      + G              I+WNF KFLV  +G  V R++   +  S++ DI   L+
Sbjct:   77 AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 216          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX1_MACFU (Glutathione peroxidase 1 OS=Macaca fuscata fuscata GN=GPX1 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.671e-14
Identity = 49/145 (33.79%), Postives = 71/145 (48.97%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS-------------------IKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            T  +YT++++L  +   +GL +L FPCNQFG QE   NE+I       R    F+  F +F+K +VNG  A PL+  L+ +      D+                   + WNF KFLV  +G  V RY+     + IE DI+ LL
Sbjct:   50 TVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLIAWSPVCRNDVAWNFEKFLVGPDGVPVRRYSRRFQTIDIEPDIEALL 194          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX6_RAT (Glutathione peroxidase 6 OS=Rattus norvegicus GN=Gpx6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKS----------SKGGLFGD-----SIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            + Y EL+ L ++ +   + +L FPCNQFG QEPG N +I       R    F   F +F+K DVNGDN   ++  LKS          S   LF D      I+WNF KFLV  +G  V R+   T    ++ DI + L
Sbjct:   77 ATYPELNTLQEELRPFNVSVLGFPCNQFGKQEPGKNSEILLGLKYVRPGGGFVPNFQLFEKGDVNGDNEQKVFSFLKSSCPPTSELLGSPEHLFWDPMKVHDIRWNFEKFLVGPDGAPVMRWFHQTPVRVVQSDIMEYL 215          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX3_RAT (Glutathione peroxidase 3 OS=Rattus norvegicus GN=Gpx3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKS----------SKGGLFGD-----SIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            Y EL+ L ++    GL IL FPCNQFG QEPG+N +I       R    F   F +F+K DVNG+     Y  LK+          S G LF +      I+WNF KFLV  +G  + R+   T+  +++ DI
Sbjct:   79 YLELNALQEELGPFGLVILGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTAELLGSPGRLFWEPMKIHDIRWNFEKFLVGPDGIPIMRWYHRTTVSNVKMDI 211          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX3_HYLLA (Glutathione peroxidase 3 OS=Hylobates lar GN=GPX3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 50/133 (37.59%), Postives = 67/133 (50.38%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGDS------------IKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            Y EL+ L ++    GL IL FPCNQFG QEPG+N +I       R    F   F +F+K DVNG+     Y  LK+S      L G S            I+WNF KFLV  +G  + R+   T+  +++ DI
Sbjct:   79 YIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGTPIMRWHHRTTVSNVKMDI 211          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX3_CEBAP (Glutathione peroxidase 3 OS=Cebus apella GN=GPX3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGDS------------IKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            Y EL+ L ++    GL++L FPCNQFG QEPG+N +I       R    F   F +F+K DVNG+     Y  LK+S      L G S            I+WNF KFLV  +G  V R+   T+  +++ DI
Sbjct:   79 YIELNALQEELAPFGLDLLGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPVMRWHHRTTISNVKMDI 211          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX3_BOVIN (Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 50/135 (37.04%), Postives = 68/135 (50.37%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR-------FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGD------------SIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDI 352
            Y EL+ L ++ +  GL IL FPCNQFG QEPG+N +I   A  +       F   F +F+K DVNG+     Y  LK+S      L G              I+WNF KFLV  +G  + R+   T+  S++ DI
Sbjct:   79 YVELNALQEELEPFGLVILGFPCNQFGKQEPGENSEI--LATLKYVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGSPDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTVNSVKMDI 211          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX1_BOVIN (Glutathione peroxidase 1 OS=Bos taurus GN=GPX1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR-------FKAEFPIFDKVDVNGDNAAPLYKHLKS-------------------SKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            T  +YT+++ L  +   +GL +L FPCNQFG QE   NE+I    C +       F+  F +F+K +VNG+ A PL+  L+                    +   +  + + WNF KFLV  +G  V RY+     + IE DI+ LL
Sbjct:   55 TVRDYTQMNDLQRRLGPRGLVVLGFPCNQFGHQENAKNEEI--LNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLL 199          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX8_MOUSE (Probable glutathione peroxidase 8 OS=Mus musculus GN=Gpx8 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.556e-14
Identity = 37/121 (30.58%), Postives = 65/121 (53.72%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            T+ +Y  L +L+ ++      +LAFPCNQFG  EP  +++++ FA   +   FPIF K+ + G  A P ++ +  S         +WNF K+LV+ EG  V+ + P     +I   + +++
Sbjct:   82 TDKSYQTLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFARQNYGVTFPIFHKIKILGPEAEPAFRFIVDSS----KKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI 198          
BLAST of CK740151 vs. ExPASy Swiss-Prot
Match: GPX_MCV1 (Glutathione peroxidase OS=Molluscum contagiosum virus subtype 1 GN=GPX1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.951e-14
Identity = 47/145 (32.41%), Postives = 68/145 (46.90%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-----QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNGVERYAPTTSPLSIEKDIKKLL 364
            T   YT++++L  +   +GL +L FPCNQFG QE   N +I            F+  F +F+K +VNG  A PL+  L+ +      D                    + WNF KFLV  +G  V RY+     L++E DI+ LL
Sbjct:   67 TVREYTQMNELQRRLGARGLVVLGFPCNQFGHQENAQNAEILPSLKHVRPGNGFEPNFMLFEKCEVNGARAHPLFAFLREALPAPSDDMSTLVSDPQLIAWSPVCRNDVAWNFEKFLVGADGTPVRRYSHRCQTLAVEPDIEALL 211          
The following BLAST results are available for this feature:
BLAST of CK740151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
GPX5_HUMAN2.045e-1435.71Epididymal secretory glutathione peroxidase OS=Hom... [more]
GPX1_MACFU2.671e-1433.79Glutathione peroxidase 1 OS=Macaca fuscata fuscata... [more]
GPX6_RAT3.489e-1436.69Glutathione peroxidase 6 OS=Rattus norvegicus GN=G... [more]
GPX3_RAT3.489e-1437.59Glutathione peroxidase 3 OS=Rattus norvegicus GN=G... [more]
GPX3_HYLLA3.489e-1437.59Glutathione peroxidase 3 OS=Hylobates lar GN=GPX3 ... [more]
GPX3_CEBAP3.489e-1437.59Glutathione peroxidase 3 OS=Cebus apella GN=GPX3 P... [more]
GPX3_BOVIN3.489e-1437.04Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=... [more]
GPX1_BOVIN3.489e-1432.65Glutathione peroxidase 1 OS=Bos taurus GN=GPX1 PE=... [more]
GPX8_MOUSE4.556e-1430.58Probable glutathione peroxidase 8 OS=Mus musculus ... [more]
GPX_MCV15.951e-1432.41Glutathione peroxidase OS=Molluscum contagiosum vi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6645 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740151 ID=CK740151; Name=CK740151; organism=Citrus sinensis; type=EST; length=432bp
GACCAATTCAAACTACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGA
ATCAAGGCTTGGAGATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAA
GAGCCAGGAGACAATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAA
GGCTGAGTTTCCCATATTTGATAAGGTTGATGTTAATGGTGATAATGCTG
CTCCTTTATACAAGCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGAC
AGCATCAAGTGGAACTTTTCCAAGTTCTTGGTGGATAAGGAGGGGAATGG
TGTTGAGCGTTATGCCCCCACCACTAGCCCTCTGAGCATTGAGAAGGATA
TAAAGAAACTTCTGGAGACTGCTTAACCGCTGCTACAGCTTGCATGATCA
GCTTCTTGCTAATAAAACTAGAGTATCATGCT
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