CK740152

Overview
NameCK740152
Unique NameCK740152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8906 contig Csv1_Contig8906:143..603. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5B_HUMAN (Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.216e-21
Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 3
Query:   90 EQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 344
            +++ +    ++ EEVA  N  K+ WL+I G+VYDV+ F+++HPGG EVL+   G DA+  FEDVGHS  AREM+ +YYIGDI PS
Sbjct:   14 QEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 98          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.588e-21
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  102 SDPKI--HQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRK 359
            SDP +  ++ EEVA  N  ++ W++I G+VYD++ F+ +HPGG EVL+   G DAT  FEDVGHS  AREM+ +YYIGD+ P+ +  K
Sbjct:   16 SDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPK 103          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB51_SCHPO (Probable cytochrome b5 1 OS=Schizosaccharomyces pombe GN=SPBC29A10.16c PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.074e-21
Identity = 46/114 (40.35%), Postives = 76/114 (66.67%), Query Frame = 3
Query:  111 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFIIKILQILVPLL 452
            K  + EE+  HN +KD +++I+GKVYDVS+F DDHPGG ++++   G+DAT  ++D+GHS +A E++++ YIGD+ P T  R +    L++P    + TP   + I  I++P +
Sbjct:    4 KYFEPEEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGTEERLK---ELKKPRSFDNDTPPLPLLIALIVLPAI 114          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_YEAST (Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.709e-21
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 3
Query:  108 PKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFIIKILQILV 443
            PK++ ++EVA HN  ++ W+II  KVYDVS F D+HPGG E+++   G+DAT  F D+GHSD A  ++   YIGD+D ++   +R  +     + NQ K    ++ IL IL+
Sbjct:    2 PKVYSYQEVAEHNGPENFWIIIDDKVYDVSQFKDEHPGGDEIIMDLGGQDATESFVDIGHSDEALRLLKGLYIGDVDKTS---ERVSVEKVSTSENQSKGSGTLVVILAILM 110          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_DROME (Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.035e-21
Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 3
Query:  129 EVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYN-QDKTPEFIIKILQILVPLLI 455
            EVA HN  KD WL+I   +YDV++F+++HPGG EVLI   GKDAT +FEDVGHS+ AR+MM KY IG++  S    + +     +P ++ + +T E  +K    LVPL++
Sbjct:   13 EVAKHNTNKDTWLLIHNNIYDVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIGELVES---ERTSVAQKSEPTWSTEQQTEESSVK--SWLVPLVL 117          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.138e-19
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  111 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPST 347
            KI   +EV+ H    D W++I  KVYD++ F+ +HPGG EVL+   GKDAT  FED+GHSD AREM+++Y IG +D ++
Sbjct:    4 KIFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLDEAS 82          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_ALOSE (Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=CYB5A PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.325e-19
Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 3
Query:  111 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 356
            K +  EE+  HN +K  WLI+  KVYD++ F+++HPGG EVL    G DAT DFEDVGHS  ARE+   Y IG++ P   P+
Sbjct:    6 KYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGELHPDDRPK 87          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_HUMAN (Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 7.377e-19
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 3
Query:   87 SEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 356
            +EQ     K +  EE+  HN +K  WLI+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  AREM   + IG++ P   P+
Sbjct:    2 AEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRPK 91          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.377e-19
Identity = 37/74 (50.00%), Postives = 56/74 (75.68%), Query Frame = 3
Query:  114 IHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 335
            I+  EEVA H    D W+I++GKVY++S+++D+HPGG EV++   G DAT  F+D+GHSD A E+++K YIG++
Sbjct:   10 IYTHEEVAQHTTHDDLWVILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNL 83          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.635e-19
Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 3
Query:   99 ASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIP-LEQPAYN-QDKTPEFIIK 425
            + D K     EVA +N     W II   VYDV++F+++HPGG EVLI   GKDAT  FEDVGHS  AREMM +Y +G++    V  +R+ +P   +P +N + KT E  +K
Sbjct:    3 SEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGEL----VAEERSNVPEKSEPTWNTEQKTEESSMK 109          
The following BLAST results are available for this feature:
BLAST of CK740152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CYB5B_HUMAN1.216e-2151.76Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1... [more]
CYB5B_RAT1.588e-2150.00Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB51_SCHPO2.074e-2140.35Probable cytochrome b5 1 OS=Schizosaccharomyces po... [more]
CYB5_YEAST2.709e-2141.96Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 ... [more]
CYB5_DROME6.035e-2146.36Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5... [more]
CYB5_RHIST1.138e-1950.63Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
CYB5_ALOSE4.325e-1950.00Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=... [more]
CYB5_HUMAN7.377e-1946.67Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2[more]
CYB5_CANTR7.377e-1950.00Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_MUSDO9.635e-1945.05Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6646 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740152 ID=CK740152; Name=CK740152; organism=Citrus sinensis; type=EST; length=461bp
GTGAGTTTGACTGCTGCAGGCTTTGACATCAACAAAGAGAGAGCCCAAAT
TCTTTTGCTCTCCTCTCTGTCTCTCTCGTCTGCAGTAGTGAACAAATGGC
CTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCGCCACGCACAACAAAA
CTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTGTATGATGTGTCCTCG
TTCATGGATGATCACCCTGGAGGACATGAGGTTTTGATTTCTGCAACTGG
GAAAGATGCAACAAATGACTTTGAAGATGTGGGTCACAGTGACTCCGCTA
GGGAGATGATGGACAAGTACTATATTGGTGACATTGATCCCTCAACTGTT
CCTCGGAAACGTGCATATATTCCACTGGAGCAACCTGCTTACAATCAAGA
CAAGACCCCTGAGTTCATTATTAAGATTCTACAGATTCTTGTGCCGCTCT
TGATATTGGGT
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