CK740152

Overview
NameCK740152
Unique NameCK740152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_RAT (Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.803e-18
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   87 SEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 341
            +EQ   D K +  EE+  H  +K  W+I+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  ARE+   Y IG++ P
Sbjct:    2 AEQSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHP 86          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_RABIT (Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 90.8929 bits (224), Expect = 2.803e-18
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 3
Query:   93 QMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLE 380
            Q   D K +  EE+  HN +K  WLI+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  ARE+   + IG++ P    R +   P+E
Sbjct:    4 QSDKDVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPD--DRSKLSKPME 97          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_HORSE (Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 2.803e-18
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   87 SEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 341
            +EQ     K +  EE+  HN +K  WLI+  KVYD++ F++DHPGG EVL    G DAT +FED+GHS  ARE+   + IG++ P
Sbjct:    2 AEQSDKAVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEDHPGGEEVLREQAGGDATENFEDIGHSTDARELSKTFIIGELHP 86          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_BOVIN (Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 3.661e-18
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 3
Query:   87 SEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEF 416
            +E+ +   K +  EE+  HN +K  WLI+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  ARE+   + IG++ P    R +   P E      D  P +
Sbjct:    2 AEESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPD--DRSKITKPSESIITTIDSNPSW 109          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB52_SCHPO (Probable cytochrome b5 2 OS=Schizosaccharomyces pombe GN=SPCC16A11.10c PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.661e-18
Identity = 36/70 (51.43%), Postives = 53/70 (75.71%), Query Frame = 3
Query:  126 EEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 335
            EEV  HN   D ++++  KVYD+S F+D HPGG EVL+   G+DA+  FEDVGHS+ A+E+++K+YIG++
Sbjct:    9 EEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHSEDAQELLEKFYIGNL 78          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_PIG (Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 4.782e-18
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   87 SEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 341
            +EQ     K +  EE+  HN +K  WLI+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  ARE+   + IG++ P
Sbjct:    2 AEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHP 86          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_MOUSE (Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.391e-17
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 3
Query:   93 QMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 341
            Q   D K +  EE+  H  +K  W+I+  KVYD++ F+++HPGG EVL    G DAT +FEDVGHS  ARE+   Y IG++ P
Sbjct:    4 QSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHP 86          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_CHICK (Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 1.391e-17
Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 3
Query:  111 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPA 389
            + ++ EEV  HN ++  W+I+  ++YD++ F+D+HPGG EVL    G DAT +FEDVGHS  AR + + + IG++ P   P+      L++PA
Sbjct:   15 RYYRLEEVQKHNNSQSTWIIVHHRIYDITKFLDEHPGGEEVLREQAGGDATENFEDVGHSTDARALSETFIIGELHPDDRPK------LQKPA 101          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.373e-17
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  108 PKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQP 386
            P+ +  EEVA HN  + CW +  GKVYD + ++D+HPGG E ++   G DAT++F  + HS  A+ M+ +YYIGD+  S      A +P  QP
Sbjct:  497 PRQYTMEEVAAHNTEESCWFVHGGKVYDATPYLDEHPGGAESILIVAGADATDEFNSI-HSSKAKAMLAQYYIGDLVASKPAAAGATVPEPQP 588          
BLAST of CK740152 vs. ExPASy Swiss-Prot
Match: CYB5_NEUCR (Probable cytochrome b5 OS=Neurospora crassa GN=B23L21.190 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 3.099e-17
Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 3
Query:  123 FEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGHEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDID-PSTVPRKRAYIP 374
            +++VA HN  KD +++I  KVYD++ F+D+HPGG EVL+   G+D+T  FEDVGHSD ARE ++   +G +   +  P+ +A +P
Sbjct:    7 YQDVAEHNTKKDLYVVIHDKVYDITKFVDEHPGGEEVLLDVAGQDSTEAFEDVGHSDEAREALEPLLVGTLKRQAGDPKPKAPLP 91          
The following BLAST results are available for this feature:
BLAST of CK740152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CYB5_RAT2.803e-1847.06Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 S... [more]
CYB5_RABIT2.803e-1844.79Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE... [more]
CYB5_HORSE2.803e-1847.06Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3[more]
CYB5_BOVIN3.661e-1840.00Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3[more]
CYB52_SCHPO3.661e-1851.43Probable cytochrome b5 2 OS=Schizosaccharomyces po... [more]
CYB5_PIG4.782e-1847.06Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3[more]
CYB5_MOUSE1.391e-1746.99Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2[more]
CYB5_CHICK1.391e-1740.86Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4[more]
NIA_VOLCA2.373e-1741.94Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
CYB5_NEUCR3.099e-1744.71Probable cytochrome b5 OS=Neurospora crassa GN=B23... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6646 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740152 ID=CK740152; Name=CK740152; organism=Citrus sinensis; type=EST; length=461bp
GTGAGTTTGACTGCTGCAGGCTTTGACATCAACAAAGAGAGAGCCCAAAT
TCTTTTGCTCTCCTCTCTGTCTCTCTCGTCTGCAGTAGTGAACAAATGGC
CTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCGCCACGCACAACAAAA
CTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTGTATGATGTGTCCTCG
TTCATGGATGATCACCCTGGAGGACATGAGGTTTTGATTTCTGCAACTGG
GAAAGATGCAACAAATGACTTTGAAGATGTGGGTCACAGTGACTCCGCTA
GGGAGATGATGGACAAGTACTATATTGGTGACATTGATCCCTCAACTGTT
CCTCGGAAACGTGCATATATTCCACTGGAGCAACCTGCTTACAATCAAGA
CAAGACCCCTGAGTTCATTATTAAGATTCTACAGATTCTTGTGCCGCTCT
TGATATTGGGT
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