CK740153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUAB (RNA pyrophosphohydrolase OS=Brucella abortus GN=rppH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---MGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUA2 (RNA pyrophosphohydrolase OS=Brucella abortus (strain 2308) GN=rppH PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---MGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUA1 (RNA pyrophosphohydrolase OS=Brucella abortus (strain S19) GN=rppH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---MGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_AZOC5 (RNA pyrophosphohydrolase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rppH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPD------SWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ + N + ++F RL P+ SWQMPQGGID+ E+P AALREL EET + S L EV WL+YD P V G ++GQ QKWF L+FTG E E Sbjct: 9 YRPCVGLAIFNRAGQVFLGQRLSGPEHVDATHSWQMPQGGIDKGEEPYEAALRELYEETSIRSVVKLGEVEDWLSYDLPGRVAGEA---WKGKYRGQTQKWFALRFTGDEGE 117
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_SILPO (RNA pyrophosphohydrolase OS=Silicibacter pomeroyi GN=rppH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ L+N +F R+D D+WQMPQGG+DE+EDP AALREL EETGV++ E++AE WL YD P ++ + G ++GQ QKW+L +F G++++ Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADLVEMVAETDGWLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQ 116
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUSU (RNA pyrophosphohydrolase OS=Brucella suis GN=rppH PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUSI (RNA pyrophosphohydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rppH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUO2 (RNA pyrophosphohydrolase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rppH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUME (RNA pyrophosphohydrolase OS=Brucella melitensis GN=rppH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BRUMB (RNA pyrophosphohydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rppH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ ++N + ++A R+ IP WQMPQGGID+ EDP AALREL EETG++S +L E W+ YD PP + + + G ++GQ QKWF +F G E E Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESE 129 The following BLAST results are available for this feature:
BLAST of CK740153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 305
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740153 ID=CK740153; Name=CK740153; organism=Citrus sinensis; type=EST; length=607bpback to top |