CK740153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_ORITB (RNA pyrophosphohydrolase OS=Orientia tsutsugamushi (strain Boryong) GN=rppH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.978e-18 Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDS-WQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ +IN K+IF R+D WQMPQGGI E A LRE+KEE G + A ++AE W +Y P + L ++KGQ QKWFL+KF GK+E+ Sbjct: 13 YRIGVGMVIINQKKEIFTGQRIDSARQYWQMPQGGIILGETYSKAVLREMKEEIGCNKAIIMAESRNWYSYHIPKFLVHKL---WNSNFKGQKQKWFLIKFLGKDED 116 HSP 2 Score: 21.1718 bits (43), Expect = 4.978e-18 Identity = 5/12 (41.67%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 542 EWKWMSPNKYLS 577 +WKWM+ N+ ++ Sbjct: 128 QWKWMNSNQLIN 139
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_WOLTR (RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rppH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VGI L N +F R D WQMPQGGID+ E + AALREL EE G A+++A+ W+ Y+ P EV + G + GQ Q+WFL+KF G+ ++ Sbjct: 8 YRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAKNKDWIYYNLPEEV---IPTCWNGRYSGQKQRWFLMKFYGEGKD 110
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BARBK (RNA pyrophosphohydrolase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rppH PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRL--------DIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEESIFLVII*EPE 536 YR+ VGI + N +++ RL ++ WQ PQGGIDE E+P AA REL EETG+ S ++ EV W YDFP E+ ++ N ++GQ QKWF +F G+ E ++I PE Sbjct: 12 YRKGVGIVVFNREGQVWIGRRLITSSHTYAEVSKLWQFPQGGIDEGEEPLDAARRELYEETGMRSVNLIKEVQDWFCYDFPQELIGHVLNN---QYRGQMQKWFAFQFIGETSE----IVINSPE 129
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_BARQU (RNA pyrophosphohydrolase OS=Bartonella quintana GN=rppH PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.203e-18 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASRL--------DIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YRR VG+ + N K++ RL ++ WQ+PQGGIDE E+P AA REL EETG+ S +++ E W YDFP ++ + ++GQ QKWF +FTGK E Sbjct: 12 YRRCVGVVVFNHEGKVWVGRRLTKYAHADTEMSHRWQLPQGGIDEGEEPLDAACRELYEETGIRSIKLIKEARDWFYYDFPQKL---VGCTLKNKYRGQIQKWFAFQFTGKLSE 122
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_SULNB (RNA pyrophosphohydrolase OS=Sulfurovum sp. (strain NBC37-1) GN=rppH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 3 Query: 180 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEESIFLVII*EPE 536 + YR NV +++S + F A R DI ++WQ PQGGIDE E P+ A REL EE G ++ E+L E P W+TYDFP R + + GQ QK+FL++ KEE I L PE Sbjct: 5 KSYRPNVAAVILSSKYPEKCEFFVAHRTDIRNAWQFPQGGIDEGETPEDALYRELLEEIGCNNVEILGEFPEWITYDFPKTARGKVY-----PFDGQTQKYFLVRL--KEEAQINLQAFEIPE 120
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_RHOPS (RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=rppH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 51/112 (45.54%), Postives = 61/112 (54.46%), Query Frame = 3 Query: 186 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLKFTGKEEE 503 YR VG+ LIN +F R +D WQMPQGG+D ED AA REL EET V S E + EVP WL YD P V G ++GQ QKWF ++FTG + E Sbjct: 9 YRTCVGMMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETNVRSVEKIGEVPDWLIYDIPRTVAGRA---WKGRYRGQRQKWFAVRFTGADSE 117
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_CAMJR (RNA pyrophosphohydrolase OS=Campylobacter jejuni (strain RM1221) GN=rppH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 180 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLK 482 + YR NV +++SS KIF A R D+ + WQ PQGGID+ E K A RELKEE G E++AE P WL+YDFP ++ + + + GQ QK+FL++ Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMY-----PYDGQIQKYFLVR 104
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_CAMJJ (RNA pyrophosphohydrolase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rppH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 180 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLK 482 + YR NV +++SS KIF A R D+ + WQ PQGGID+ E K A RELKEE G E++AE P WL+YDFP ++ + + + GQ QK+FL++ Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMY-----PYDGQIQKYFLVR 104
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_CAMJD (RNA pyrophosphohydrolase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rppH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 180 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLK 482 + YR NV +++SS KIF A R D+ + WQ PQGGID+ E K A RELKEE G E++AE P WL+YDFP ++ + + + GQ QK+FL++ Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESAKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPGKIVKKMY-----PYDGQIQKYFLVR 104
BLAST of CK740153 vs. ExPASy Swiss-Prot
Match: RPPH_CAMJ8 (RNA pyrophosphohydrolase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rppH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 180 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVRENLNINGGGDWKGQAQKWFLLK 482 + YR NV +++SS KIF A R D+ + WQ PQGGID+ E K A RELKEE G E++AE P WL+YDFP ++ + + + GQ QK+FL++ Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMY-----PYDGQIQKYFLVR 104 The following BLAST results are available for this feature:
BLAST of CK740153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 305
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740153 ID=CK740153; Name=CK740153; organism=Citrus sinensis; type=EST; length=607bpback to top |