CK740157

Overview
NameCK740157
Unique NameCK740157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:698..1220. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT2_DROME (Actin-42A OS=Drosophila melanogaster GN=Act42A PE=1 SV=3)

HSP 1 Score: 306.22 bits (783), Expect = 5.950e-83
Identity = 151/174 (86.78%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK VAPPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT1_LYTPI (Actin, cytoskeletal 1 OS=Lytechinus pictus PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 5.950e-83
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE++TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+AGIHET YNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYTFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 7.771e-83
Identity = 148/174 (85.06%), Postives = 162/174 (93.10%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE ++QPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT3A_HELAM (Actin, cytoplasmic A3a OS=Helicoverpa armigera GN=actA3a PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 7.771e-83
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+E E+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEITALAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTM_APLCA (Actin, muscle OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 150/174 (86.21%), Postives = 162/174 (93.10%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQP L+GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEIT+LAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPILLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTC_BRALA (Actin, cytoplasmic OS=Branchiostoma lanceolatum PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 148/174 (85.06%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+ G+HETTYNSIMKCD+DIRKDLY N VLSGG+TMFPGIADRM KEITALAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTC_BRAFL (Actin, cytoplasmic OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 148/174 (85.06%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+ G+HETTYNSIMKCD+DIRKDLY N VLSGG+TMFPGIADRM KEITALAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 149/174 (85.63%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA +SSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACTB_XENTR (Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.015e-82
Identity = 149/174 (85.63%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK +APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
The following BLAST results are available for this feature:
BLAST of CK740157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
ACT2_DROME5.950e-8386.78Actin-42A OS=Drosophila melanogaster GN=Act42A PE=... [more]
ACT1_LYTPI5.950e-8386.21Actin, cytoskeletal 1 OS=Lytechinus pictus PE=2 SV... [more]
ACTC_HELTI7.771e-8385.06Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1[more]
ACT3A_HELAM7.771e-8386.21Actin, cytoplasmic A3a OS=Helicoverpa armigera GN=... [more]
ACT_PLAMG1.015e-8286.21Actin, adductor muscle OS=Placopecten magellanicus... [more]
ACTM_APLCA1.015e-8286.21Actin, muscle OS=Aplysia californica PE=2 SV=1[more]
ACTC_BRALA1.015e-8285.06Actin, cytoplasmic OS=Branchiostoma lanceolatum PE... [more]
ACTC_BRAFL1.015e-8285.06Actin, cytoplasmic OS=Branchiostoma floridae PE=2 ... [more]
ACTC_BIOPF1.015e-8285.63Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]
ACTB_XENTR1.015e-8285.63Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6651 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740157 ID=CK740157; Name=CK740157; organism=Citrus sinensis; type=EST; length=523bp
GAAGATTCTTACTGAGAGAGGTTACATGTTTACCACCACAGCCGAACGGG
AAATTGTCCGTGACATGAAGGAGAAGCTTGCTTATGTTGCCCTAGACTAT
GAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATCTGTTGAGAAGAACTA
TGAGCTGCCTGATGGCCAGATCATCACCATTGGAGCTGAAAGATTCCGTT
GCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGAATGGAAGCTGCTGGT
ATTCATGAGACTACCTACAACTCCATCATGAAGTGTGATGTGGATATTAG
AAAGGATCTGTATGGTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCC
CCGGTATTGCCGACCGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGC
AGCATGAAGATCAAGGGCGTGGCTCCACCAGAGAGAAAATACAGTGTTTG
GATTGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGA
TCTCAAAGGGCGAGTATGATGAG
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