CK740158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.620e-16 Identity = 39/81 (48.15%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 +++ Y +VLKQVH + +S +A+ +M+S I+DI +++A EA +LA Y K+ TITSR+IQ AVRL+LPG++ K A ++GT Sbjct: 161 DSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGT 241
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2BWT_HUMAN (Histone H2B type W-T OS=Homo sapiens GN=H2BFWT PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 4.758e-15 Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 +++ Y +VLKQVH + +S +A+ +M+S ++DI +++A EA RLAR K+ TIT+ E + AVRL+LPG++ K A SEGT Sbjct: 79 DSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGRLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGT 159
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2BV_BOVIN (Histone H2B subacrosomal variant OS=Bos taurus GN=SUBH2BV PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 3 Query: 255 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 497 + Y +YI +VLK+V P GISS+ + I+N+ IND+FE+++ EA L Y K+ T+T +I+ AV L+LP +LAK+AV+ G Sbjct: 32 LRNYSLYINRVLKEVVPQKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLLLPEKLAKYAVAFG 112
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2BV_MOUSE (Histone H2B subacrosomal variant OS=Mus musculus GN=Subh2bv PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 2.886e-12 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 264 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 Y +YI +VLK+V P+ GISS ++ IMN INDIFE++A EA + K+ T+T +IQ AV L+LP +LA AV+ G+ Sbjct: 36 YSLYINRVLKEVVPNRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLLLPKKLATLAVTFGS 114 The following BLAST results are available for this feature:
BLAST of CK740158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740158 ID=CK740158; Name=CK740158; organism=Citrus sinensis; type=EST; length=502bpback to top |