CK740158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B4_WHEAT (Histone H2B.4 OS=Triticum aestivum GN=TH153 PE=1 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 8.340e-36 Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 3 Query: 252 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 S+ETYKIYIFKVLKQVHPDIGISSKAM I NSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGT Sbjct: 44 SMETYKIYIFKVLKQVHPDIGISSKAMSITNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGT 126
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.423e-35 Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 3 Query: 252 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ++ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 144
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.423e-35 Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 3 Query: 252 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ++ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 144
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.423e-35 Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 3 Query: 252 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ++ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 65 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 147
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.423e-35 Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 3 Query: 252 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ++ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 144
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 4.139e-35 Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 66 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 146
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 4.139e-35 Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGT Sbjct: 68 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGT 148
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B_PEA (Histone H2B (Fragments) OS=Pisum sativum GN=HIS2B PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 2.966e-33 Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 3 Query: 261 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 T KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA EASRLARYNKK TIT REIQTAVRL+LPGE+AKH VSE T Sbjct: 31 TVKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASEASRLARYNKKSTITPREIQTAVRLLLPGEVAKHKVSEAT 110
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B3B_MOUSE (Histone H2B type 3-B OS=Mus musculus GN=Hist3h2bb PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 3.874e-33 Identity = 67/81 (82.72%), Postives = 76/81 (93.83%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 E+Y IY++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGT Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGT 116
BLAST of CK740158 vs. ExPASy Swiss-Prot
Match: H2B3B_HUMAN (Histone H2B type 3-B OS=Homo sapiens GN=HIST3H2BB PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 3.874e-33 Identity = 67/81 (82.72%), Postives = 76/81 (93.83%), Query Frame = 3 Query: 258 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGT 500 E+Y IY++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGT Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGT 116 The following BLAST results are available for this feature:
BLAST of CK740158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740158 ID=CK740158; Name=CK740158; organism=Citrus sinensis; type=EST; length=502bpback to top |