CK740164

Overview
NameCK740164
Unique NameCK740164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.104e-42
Identity = 89/160 (55.62%), Postives = 116/160 (72.50%), Query Frame = 2
Query:   89 GFDSPFFSILEDVLELPEEQENTRNN------PSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            G ++P    L+ +L++P+       +      P+R YV DA+AMA TPADV E P +Y FVVDMPG+   +IKVQVE E VLV+SGER+R+ +E       KY+RMERR GKFMRKFVLPDNA+++KISA+C+DGVL VTVEK+PPP+   PKTI+V+VA
Sbjct:    7 GLETPLMVALQHLLDVPDGDAGAGGDKAGGGGPTRTYVADARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERED-----AKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.882e-42
Identity = 89/161 (55.28%), Postives = 120/161 (74.53%), Query Frame = 2
Query:   68 MDLRSLAGFDSPFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            MD R + G ++P  + L  +L++P+  +      +R YVRDA+AMAATPADV E   +Y FVVDMPG+   +I+VQVE E VLV+SGER+R+ +E       KY+RMERR GKFMRKFVLPDNA+V+K++A+C+DGVL VTVEK+PPP+   PKTI+++VA
Sbjct:    1 MDAR-MFGLETPRVAALHHLLDVPDG-DKAGGGATRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERED-----AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP19_ORYSJ (19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.724e-33
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = 2
Query:  128 LELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNS--YVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNK-DGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK---TIQVQVA 541
            L+LP+E E   N P+RAYVRD +AMA TP DV E   S   V  VDMPG+  ++++V+VE  NVL +SGER+R   + D+  +GVKY+RMERR GKFMR+F LP++A+++ + A  +DGVL VTV+K PPP+PK    ++V+VA
Sbjct:   22 LDLPDELERQLNPPTRAYVRDRRAMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVLTVTVDKKPPPEPKKPRVVEVKVA 165          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS174_ARATH (17.4 kDa class III heat shock protein OS=Arabidopsis thaliana GN=HSP17.4B PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.657e-22
Identity = 57/151 (37.75%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  104 FFSILEDV--LELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGK-FMRKFVLPDNANVEKISALCQDGVLIVTVEKVP--PPQPKTIQVQVA 541
            FF + E +  L LP  +    NN SR       +    P D++E P  Y+F +D+PGI  S+I+V VE E  LV+    KR   + ++++G KY+R+ERR  +  ++KF LP++A++  ++A  Q+GVL V ++K+P  PP+PKT+Q+ V+
Sbjct:    9 FFGLPEAIEKLILPISRSGESNNESRG----RGSSNNIPIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKLPPQPPKPKTVQIAVS 155          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.832e-21
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 2
Query:  101 PFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            PF   L D  E      +   N S A  RD  A      D  E P ++VF  D+PG+K  E+KV+VE +NVL +SGER ++ +EK++    K+ R+ER  GKFMR+F LP+NA +E++ A  ++GVL V V K P  +P+   + ++
Sbjct:   18 PFSQDLWDPFEGFFTPSSALANASTA--RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKND----KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21
Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = 2
Query:  185 RDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEK--VPPPQPKTIQV 532
            RD  A A    D  E P S+VF  D+PG+K  E+KV+VE  NVLV+SG+R ++ ++K++    K+ R+ER  G+FMR+F LP+NA V+++ A  ++GVL VTV K  V  P+ K I++
Sbjct:   34 RDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKND----KWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEI 147          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 2
Query:  155 TRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            T +  S  + ++  A A T  D  E P ++VF  D+PG+K  E+KV+VE   VL +SGER ++ +EK+N    K+ R+E   GKF+R+F LP+NANV+++ A  ++GVL VTV KV   +P+   + ++
Sbjct:   34 TSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNN----KWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHIS 158          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 2
Query:   71 DLRSLAGFDSPFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            D RS + FD     + +   EL     N+          ++ A A T  D  E P  +VF VD+PG+K  E+KV+VE + VL +SGER  + ++K++    K+ RMER  GKFMR+F LP+NA ++++ A  ++GVL VTV  E+V  P+ K+I++
Sbjct:   10 DRRSSSMFDPFSIDVFDPFRELGFPSTNSG---------ESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKND----KWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEI 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20
Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEK--VPPPQPKTIQV 532
            +  A A    D  E P ++VF VD+PG+K  E+KV+VE  NVLVVSGER R+ ++K++    K+ R+ER  GKF+R+F LP++A VE++ A  ++GVL VTV K  V  P+ K I++
Sbjct:   37 ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKND----KWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEI 149          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            DA A A    D  E P  +VF  D+PG+K  E+KV+V+  N+L +SGER R+ +EK +    K+ R+ER  GKF+R+F LP+N   E+I A  ++GVL VTV K  P +P    +Q++
Sbjct:   45 DAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSD----KWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQIS 158          
The following BLAST results are available for this feature:
BLAST of CK740164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP21_MAIZE1.104e-4255.6317.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP23_MAIZE1.882e-4255.2817.0 kDa class II heat shock protein OS=Zea mays G... [more]
HSP19_ORYSJ2.724e-3352.0819.0 kDa class II heat shock protein OS=Oryza sati... [more]
HS174_ARATH1.657e-2237.7517.4 kDa class III heat shock protein OS=Arabidops... [more]
HS181_ARATH1.832e-2139.4618.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16C_ORYSJ4.081e-2144.9216.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HSP12_DAUCA6.960e-2140.3118.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_SOLLC1.551e-2038.4617.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS16A_WHEAT1.551e-2046.1516.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS177_ORYSJ2.025e-2043.2217.7 kDa class I heat shock protein OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6658 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740164 ID=CK740164; Name=CK740164; organism=Citrus sinensis; type=EST; length=612bp
CAAACACAAAATCGCACTAGCATAGCTAAAGCTCTCGCATATATATAAAA
AAAGAGAAGAATACAACATGGATCTAAGAAGCCTAGCAGGTTTCGATTCA
CCATTCTTCTCAATCCTCGAAGACGTGCTGGAGCTGCCTGAAGAACAAGA
AAATACCCGAAACAACCCGTCAAGAGCCTACGTTCGGGATGCCAAAGCCA
TGGCGGCAACACCAGCAGATGTGGTGGAGTATCCGAATTCATACGTGTTC
GTTGTGGACATGCCAGGGATTAAGGCCAGCGAGATCAAGGTCCAAGTTGA
GAGCGAAAACGTGCTCGTGGTCAGCGGAGAGCGGAAACGGGATCCCAAGG
AGAAAGATAACAAAGATGGTGTTAAGTACGTGAGAATGGAGAGGAGGTTT
GGCAAGTTTATGAGGAAGTTCGTGCTGCCTGACAATGCTAATGTGGAAAA
GATATCTGCGTTGTGTCAGGACGGTGTTTTGATAGTCACTGTCGAGAAAG
TGCCCCCACCGCAGCCAAAGACCATTCAGGTTCAAGTTGCCTGAGACATT
TTAATTTGGGTGTGTTTGTGACTCAATTATCAATCTGACTATCTGAGTGT
CGTGATGTTTGT
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