CK740164

Overview
NameCK740164
Unique NameCK740164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  185 RDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV---EKVPPPQPKTIQV 532
            R+  A+     D  E P ++V   D+PG+K  E+KV+VE   VL +SGER R+ +EKD+     + R+ER  GKF+R+F LP+NA ++++ A+ ++GVL V V   E+   P  K I +
Sbjct:   37 RETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDD----TWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDI 151          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16
Identity = 42/108 (38.89%), Postives = 69/108 (63.89%), Query Frame = 2
Query:  197 AMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK 520
            A++    D  E    +  ++D+PG+K  E+K++VE   VL VSGERKR+ ++K    G ++ R+ER +GKF R+F LPDN ++E + A  ++GVL + + K+ P + K
Sbjct:   67 ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKK----GDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVK 170          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16
Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  197 AMAATPADVVEYPNSYVFVVDMPGIKASEIKVQV-ESENVLVVSGERKRD---PKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVP 505
            A+A    D  E P ++V  VD+PG++  +++V+V E+  VL VSGER+R     +E+  +DGV++ R ER  G+F R+F +P  A+V +++A   DGVL VTV KVP
Sbjct:   68 AVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVP 174          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 2
Query:  218 DVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            D  E P ++VF  D+PG++  + KV+VE   VLV+SGER R+ ++ D K+  ++  +ER  GKF R+F LP  A V+++SA   +GVL VTV  E+   PQ K I +
Sbjct:   43 DWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERARE-EDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPI 148          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.952e-16
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  167 PSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            P+ +   +  A   T  D  E   ++V   D+PG+K  E+KVQ+E + VL +SGER  + ++K++     + R++R  GKFMR+F LP+NA VE++ A  ++GVL VT+  E+V     K I++
Sbjct:   33 PTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKND----TWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEI 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  170 SRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            S +  R+  A+     D  E P ++VF  D+PG+K  E+KV++E ++VL +SGER  + ++K++     + R+ER  G+F R+F LP+N  ++++ A  ++GVL VTV K    +     +Q++
Sbjct:   33 SSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKND----TWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  197 AMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            A  +T  D  E P ++VF  D+PG+K  E+K++++   VL +SGER  + ++K++     + R+ER  GK +R+F LP+NA V+++ A  ++GVL VTV  E++  P  K I +
Sbjct:   42 AFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKND----TWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDI 151          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.962e-15
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  218 DVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKV 502
            D  E P  +V +VD+PG+K  +IK++VE   VL VSGERK++    ++K G  + R+ER +GKF R+F LP N +++ + A  ++GVL +T+ K+
Sbjct:   78 DWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKE----EDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKL 168          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.370e-15
Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK 520
            +  A+     D  E   ++VF  D+PG+K  E+KV++E ++VL +SGER  + +EK +     + R+ER  G+F RKF LP+N  ++++ A  ++GVL VTV KV   + K
Sbjct:   41 ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQD----TWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKK 147          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 2
Query:  191 AKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK 520
            + A+A    D  E   ++VF  D+PG+K  E+KV++E ++VL +SGER  + +EK +     + R+ER  G F RKF LP+N  ++++ A  ++GVL VTV KV   + K
Sbjct:   40 SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQD----TWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKK 145          
The following BLAST results are available for this feature:
BLAST of CK740164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP11_HELAN1.358e-1639.5017.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP22_ARATH3.026e-1638.8922.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS219_ORYSJ3.026e-1642.9921.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS166_ORYSJ3.026e-1642.9916.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP15_SOYBN3.952e-1637.1017.6 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH8.805e-1633.8717.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_SOYBN1.150e-1537.7217.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP41_PEA1.962e-1542.1122.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS178_ARATH4.370e-1537.8417.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17A_ARATH7.454e-1539.0917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6658 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740164 ID=CK740164; Name=CK740164; organism=Citrus sinensis; type=EST; length=612bp
CAAACACAAAATCGCACTAGCATAGCTAAAGCTCTCGCATATATATAAAA
AAAGAGAAGAATACAACATGGATCTAAGAAGCCTAGCAGGTTTCGATTCA
CCATTCTTCTCAATCCTCGAAGACGTGCTGGAGCTGCCTGAAGAACAAGA
AAATACCCGAAACAACCCGTCAAGAGCCTACGTTCGGGATGCCAAAGCCA
TGGCGGCAACACCAGCAGATGTGGTGGAGTATCCGAATTCATACGTGTTC
GTTGTGGACATGCCAGGGATTAAGGCCAGCGAGATCAAGGTCCAAGTTGA
GAGCGAAAACGTGCTCGTGGTCAGCGGAGAGCGGAAACGGGATCCCAAGG
AGAAAGATAACAAAGATGGTGTTAAGTACGTGAGAATGGAGAGGAGGTTT
GGCAAGTTTATGAGGAAGTTCGTGCTGCCTGACAATGCTAATGTGGAAAA
GATATCTGCGTTGTGTCAGGACGGTGTTTTGATAGTCACTGTCGAGAAAG
TGCCCCCACCGCAGCCAAAGACCATTCAGGTTCAAGTTGCCTGAGACATT
TTAATTTGGGTGTGTTTGTGACTCAATTATCAATCTGACTATCTGAGTGT
CGTGATGTTTGT
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