CK740171
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: POR_AVESA (Protochlorophyllide reductase (Fragment) OS=Avena sativa PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.421e-70 Identity = 127/149 (85.23%), Postives = 139/149 (93.29%), Query Frame = 3 Query: 3 GGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 446 GGL G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HE+TGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV +PSLTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 165 GGLTGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: PORA_HORVU (Protochlorophyllide reductase A, chloroplastic OS=Hordeum vulgare GN=PORA PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 1.855e-70 Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 3 Query: 3 GGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 446 GGL+G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++P LTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 240 GGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: POR_MARPA (Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 2.679e-69 Identity = 120/147 (81.63%), Postives = 136/147 (92.52%), Query Frame = 3 Query: 3 GGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGL 443 GGLNG+NSSSMIDGG+FDGAKAYKDSKVCNM TMQEFHRR+H ETGI F+SLYPGCIA TGLFR H+ LFR LFPPFQKYITKGYVSE+EAGKR+AQVVSDP L+KSGVYWSWNKDS SFEN+LS+EAS+ EKA+++WE+SE+L GL Sbjct: 311 GGLNGVNSSSMIDGGEFDGAKAYKDSKVCNMFTMQEFHRRYHAETGITFSSLYPGCIAETGLFRNHVTLFRTLFPPFQKYITKGYVSEEEAGKRMAQVVSDPKLSKSGVYWSWNKDSGSFENELSEEASNPEKAKRLWELSERLSGL 457
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 8.367e-55 Identity = 99/153 (64.71%), Postives = 125/153 (81.70%), Query Frame = 3 Query: 3 GGLNGLNS-----SSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 446 G L+GL + + M+DG +F+GAKAYKDSKV M+T+++ H+RFH+ TGI FASLYPGCIA TGLFREH+PLF+ LFPPFQKYITKGYVSE+EAG+RLA V+SDP L KSG YWSW+ + SF+NQ+S+E +D KA K+W+IS KLVGL+ Sbjct: 244 GDLSGLAAGVPAANPMMDGQEFNGAKAYKDSKVACMMTVRQMHQRFHDATGITFASLYPGCIAETGLFREHVPLFKTLFPPFQKYITKGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISAKLVGLS 396
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: POR_PLEBO (Light-dependent protochlorophyllide reductase OS=Plectonema boryanum GN=por PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.253e-42 Identity = 84/157 (53.50%), Postives = 113/157 (71.97%), Query Frame = 3 Query: 3 GGLNGLNSS-----SMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW----NKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 446 G L+GL + +MIDG F KAYKDSK+CNM+T +E HRR+H+ TGI F +LYPGC+A T LFR +P+F+ +FP FQK IT GYVS++ AG+R AQVV+DP +SGV+WSW + SF +LS++ +D KA+++WE+SEKLVGLA Sbjct: 166 GDLSGLEAGFKAPIAMIDGKPFKAGKAYKDSKLCNMITSRELHRRYHDSTGIVFNTLYPGCVADTPLFRNSLPVFQKVFPWFQKNITGGYVSQELAGERTAQVVADPEFKQSGVHWSWGNRQKEGRESFVQELSEKVTDDAKAKRMWELSEKLVGLA 322
BLAST of CK740171 vs. ExPASy Swiss-Prot
Match: POR_SYNY3 (Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803) GN=por PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.637e-42 Identity = 82/142 (57.75%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 30 SMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW-NKDSA---SFENQLSQEASDVEKARKVWEISEKLVGL 443 +MI+ F KAYKDSK+CNMLT +E HRRFH+ETGI F SLYPGC+A T LFR H LFR +FP FQK +TKGYVS++ AG+R+A VV+D SGV+WSW N+ A +F +LS++ SD +KA+++W++SEKLVGL Sbjct: 180 AMINNKKFKSGKAYKDSKLCNMLTTRELHRRFHQETGIVFNSLYPGCVADTPLFRNHYSLFRTIFPWFQKNVTKGYVSQELAGERVAMVVADDKFKDSGVHWSWGNRQQAGREAFVQELSEQGSDAQKAQRMWDLSEKLVGL 321 The following BLAST results are available for this feature:
BLAST of CK740171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740171 ID=CK740171; Name=CK740171; organism=Citrus sinensis; type=EST; length=577bpback to top |