CK740172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.755e-49 Identity = 92/181 (50.83%), Postives = 130/181 (71.82%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERR 545 VGRVETG+L+PG V F P+G++ EVKS+EMHHE + +A PGDN+GFNV+ V+ KD+KRG V + D+P A FT+Q++++ HP I GY PV HT+ +A F EL+ K+D R+G+ +E+ P+FLK GDA +VK+ PTKPMV+E + P LGRFA+RDM T+A G+ +V+ + Sbjct: 247 VGRVETGILRPGDKVVFEPAGVSGEVKSIEMHHEQIPQAEPGDNIGFNVRGVSKKDIKRGDVCGHP-DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48 Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 524 VGRVETGVLK G V F P+G++ EVKS+EMHHE +++A PGDN+GFNV+ V D++RG VA + D+P + A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 233 VGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGHL-DNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48 Identity = 93/188 (49.47%), Postives = 132/188 (70.21%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETGVLK G V+ F P+ + EVKS+EMHHE++ EALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P LGRFA+RDM QTVA G++ ++++ Sbjct: 239 VGRVETGVLKVGDVIIFEPASTIFHKPIQGEVKSIEMHHESMPEALPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48 Identity = 93/181 (51.38%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERR 545 VGRVETG+LK G ++F P+ +T EVKS+EMHHE EALPGDNVGFNV+ +A D++RG V ++ P A FT+QV+++ HP + GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ +V+ + Sbjct: 243 VGRVETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVCGPIENPPT-VAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48 Identity = 90/179 (50.28%), Postives = 130/179 (72.63%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 539 VGRVETGVLK G V F P G+ EV+S+EMHH+ LQ+A PGDN+GFNV+ ++ KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ +V+ Sbjct: 253 VGRVETGVLKVGDKVVFMPPGVVGEVRSIEMHHQPLQQAEPGDNIGFNVRGISKKDIRRGDVAGHV-DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.310e-48 Identity = 93/188 (49.47%), Postives = 131/188 (69.68%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ ++++ Sbjct: 239 VGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48 Identity = 93/188 (49.47%), Postives = 131/188 (69.68%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ ++++ Sbjct: 239 VGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48 Identity = 90/174 (51.72%), Postives = 124/174 (71.26%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 524 VGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A +FT+Q++++ HP + +GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ Sbjct: 247 VGRVETGIIKPGDKVVFEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGM 419
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 9.632e-48 Identity = 93/181 (51.38%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERR 545 VGRVETGVLKPG V F P+ +VKS+EMHHE LQ+A PGDN+GFNV+ +A D+KRG V + D P FT+Q+I++NHP I GY PV HT+ +A + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++E+R Sbjct: 245 VGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGHL-DTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.632e-48 Identity = 92/179 (51.40%), Postives = 126/179 (70.39%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 539 VGRVETGVLK G + F P+GL EVK++E HH +++A PGDN+GFNVK V KD+KRG VA S D P A FT+++++M HP I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 253 VGRVETGVLKVGDKLVFMPAGLVAEVKTIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVAG-SLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430 The following BLAST results are available for this feature:
BLAST of CK740172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740172 ID=CK740172; Name=CK740172; organism=Citrus sinensis; type=EST; length=644bpback to top |