CK740172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 89/188 (47.34%), Postives = 130/188 (69.15%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ +++R Sbjct: 241 VGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 89/188 (47.34%), Postives = 130/188 (69.15%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ +++R Sbjct: 239 VGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 524 VGR+ETG+LK + F P+G+T EVKS+EMHHE L +A PGDNVGFNV+ V D+KRG VA +++ P+ A F +Q++++ HPG + GY PV HT+ +A F L K+D +G+ E+ P FLK GDA +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 233 VGRIETGILKTAENIAFEPAGVTGEVKSIEMHHEVLDKAEPGDNVGFNVRGVGKNDIKRGDVAGTTQNPPS-VAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.538e-45 Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETG LK G VV F P+ + EVKS+EMHHE LQEALPGDN+GFNV+ V+ D+KRG VA + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ ++++ Sbjct: 239 VGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.623e-45 Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETGVLK G + P EVKS+E HH LQEA+PGDN+GFNVK V L+RG VA ++ + P A FT ++ ++ HP I GY PVL HT+ + V F EL+ K+D R+G E++P+++K GD+ +V+ P KP+VVE +S++PPLGRFA+RD +T+A GV+ +V++ Sbjct: 251 VGRVETGVLKVGDKIIINPPKAVGEVKSIETHHTPLQEAIPGDNIGFNVKGVEKSQLRRGDVAGHTTNPPT-VAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKK 429
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.623e-45 Identity = 88/181 (48.62%), Postives = 124/181 (68.51%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERR 545 VGRVETGV+KPG V F P+G++ E+K++E HHE L +A PGDNVGFNV+ V KD+K+G V + + P A FT+Q++++ HP + GY PV HT+ +A F EL K++ +G+ E+ P FLK GDA +VK++PTKPMV+E + P LGRFA+RDM TVA G+ +V+ + Sbjct: 247 VGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPT-VAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAK 426
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.426e-45 Identity = 110/218 (50.46%), Postives = 141/218 (64.68%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSG-LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL-------------EKEPK------FLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERRIQQVPRSPSLQPRRSES 596 VGRVETG+LK GM VTF P+G EVKSVEMHH ++ +A+PGDNVGFNVK + VKD+KRG V ++K+DP F + VII +H I NGY PVLDCHT+HIA KF+ +++K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAVGVI+ V+ R + L P R ES Sbjct: 280 VGRVETGILKAGMQVTFEPAGKAAVEVKSVEMHHTSVPQAIPGDNVGFNVK-LTVKDIKRGDVCGDTKNDPPIPTECFLANVIIQDHKN-IRNGYTPVLDCHTAHIACKFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRNMAKGATEEL-PIRGES 493
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.474e-45 Identity = 87/181 (48.07%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVERR 545 VGRVETG +K G V F P G EVKS+EMHHE + +ALPGDN+G+NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + EL K+D +SG+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ +V+++ Sbjct: 243 VGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.843e-45 Identity = 93/190 (48.95%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTT-------EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVER 542 VGRVETGVL+ G V F P+ T EV+S+EMHHE ++ A PGDN+GFNVK V D+ RG VA + D+PA F +Q++++ HP I GY PV CHT+ +A KF EL+ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA G+ +E+ Sbjct: 233 VGRVETGVLEVGDTVRFEPAYTATGGRKGEGEVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACHP-DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEK 421
BLAST of CK740172 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.632e-45 Identity = 87/179 (48.60%), Postives = 127/179 (70.95%), Query Frame = 3 Query: 3 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 539 VGRVETGVL+ G V F P EV+S+E HH +++A PGDN+GFNV+ V+ +D++RG VA + D+P A FT++V I+ HP I GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ +V+ Sbjct: 252 VGRVETGVLRVGDKVVFMPPAKVGEVRSIETHHVRIEKAEPGDNIGFNVRGVSKRDIRRGDVAGHL-DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429 The following BLAST results are available for this feature:
BLAST of CK740172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740172 ID=CK740172; Name=CK740172; organism=Citrus sinensis; type=EST; length=644bpback to top |