CK740174

Overview
NameCK740174
Unique NameCK740174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3888 contig Csv1_Contig3888:1309..2000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAAB (ATP synthase subunit alpha OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAA9 (ATP synthase subunit alpha OS=Staphylococcus aureus (strain JH9) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAA8 (ATP synthase subunit alpha OS=Staphylococcus aureus (strain NCTC 8325) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAA3 (ATP synthase subunit alpha OS=Staphylococcus aureus (strain USA300) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAA2 (ATP synthase subunit alpha OS=Staphylococcus aureus (strain JH1) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_STAA1 (ATP synthase subunit alpha OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 172/229 (75.11%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A  P+ L Y+APY+G  + E FM+  +H LI+YDDL+KQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   LG GS+TALPI+ETQ+GD+SAY+PTNVISITDGQIFL +DLF +G+RPAIN G SVSRVG +AQIKAMK+VAG L+                SDLD+ T ++L RG+R  E+LKQ Q  PL VE Q++ IY  T GYLD + +  + +
Sbjct:  227 SASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_CORDI (ATP synthase subunit alpha OS=Corynebacterium diphtheriae GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/228 (60.96%), Postives = 175/228 (76.75%), Query Frame = 3
Query:    9 ADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            A   A  ++LAP+ GAAL +++MY+  H L+IYDDL+KQA+AYR +SLLLRRPPGREAYPGDVFYLHSRLLERAAKL   +G GSMTALPI+ET++ DVSA+IPTNVISITDGQ+FL +DLFN G+RPAINVG+SVSRVG AAQ K MK+V+G L+                SDLD A++ QL RG RL ELLKQA+ AP +VE QI++I+   NG+ D++ +  +R+
Sbjct:  239 ASDSAGFKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAYRDLEAFATFASDLDAASKAQLDRGARLVELLKQAENAPQSVEHQIVSIWLAGNGHFDTVPVEDIRR 466          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_CLOPE (ATP synthase subunit alpha OS=Clostridium perfringens GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 141/229 (61.57%), Postives = 171/229 (74.67%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A   A LQY+APY+G  + EYFM + +H LIIYDDLSK A AYR MSLL+RRPPGREAYPGDVFY+HSRLLERAAKL  + G GS+TALPI+ET +GDV+AYIPTNVISITDGQIFL  +LFNAG RPA+N GISVSRVG  AQIKAMKQV+G L+                SDLDK TQ +L +G+RL E+LKQ Q  P+ VE+QIM IY   N +L  +++  +++
Sbjct:  227 SASESAPLQYIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRELASFAQFGSDLDKDTQARLEKGKRLIEILKQDQYKPMAVEKQIMIIYAAVNNFLLDIKVSDIKR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_CLOP1 (ATP synthase subunit alpha OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 141/229 (61.57%), Postives = 171/229 (74.67%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            +A   A LQY+APY+G  + EYFM + +H LIIYDDLSK A AYR MSLL+RRPPGREAYPGDVFY+HSRLLERAAKL  + G GS+TALPI+ET +GDV+AYIPTNVISITDGQIFL  +LFNAG RPA+N GISVSRVG  AQIKAMKQV+G L+                SDLDK TQ +L +G+RL E+LKQ Q  P+ VE+QIM IY   N +L  +++  +++
Sbjct:  227 SASESAPLQYIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRELASFAQFGSDLDKDTQARLEKGKRLIEILKQDQYKPMAVEKQIMIIYAAVNNFLLDIKVSDIKR 455          
BLAST of CK740174 vs. ExPASy Swiss-Prot
Match: ATPA_CLOB8 (ATP synthase subunit alpha OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=atpA PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.379e-74
Identity = 139/229 (60.70%), Postives = 173/229 (75.55%), Query Frame = 3
Query:    6 TADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRK 692
            TA   A LQY+APY+G  + EYFM++ +  LIIYDDLSK A AYR MSLLL+RPPGREAYPGDVFY+HSRLLERAAKL  +LG GS+TALPI+ETQ+GDV+AYIPTNVISITDGQIFL +DLFNAG RPA+N GISVSRVG +AQIKAMKQV+G L+                SDLD  +  +L +G+RL E+LKQ Q +PL V +QI+ +Y   N +L  +++  +++
Sbjct:  227 TASESAPLQYMAPYSGCTIGEYFMHQGKDVLIIYDDLSKHATAYRAMSLLLKRPPGREAYPGDVFYIHSRLLERAAKLSKELGGGSITALPIIETQAGDVTAYIPTNVISITDGQIFLESDLFNAGQRPAVNAGISVSRVGGSAQIKAMKQVSGTLRLELAQYRELEAFSQFGSDLDADSSRRLEKGKRLVEVLKQDQYSPLEVGKQIIILYAAVNDFLSDIKVSDIKR 455          
The following BLAST results are available for this feature:
BLAST of CK740174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_STAAB1.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_STAA91.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_STAA81.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_STAA31.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_STAA21.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_STAA11.379e-7460.70ATP synthase subunit alpha OS=Staphylococcus aureu... [more]
ATPA_CORDI1.379e-7460.96ATP synthase subunit alpha OS=Corynebacterium diph... [more]
ATPA_CLOPE1.379e-7461.57ATP synthase subunit alpha OS=Clostridium perfring... [more]
ATPA_CLOP11.379e-7461.57ATP synthase subunit alpha OS=Clostridium perfring... [more]
ATPA_CLOB81.379e-7460.70ATP synthase subunit alpha OS=Clostridium beijerin... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6669 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740174 ID=CK740174; Name=CK740174; organism=Citrus sinensis; type=EST; length=692bp
CCGAAACGGCGGATTCCCCCGCTACGTTACAATACCTCGCTCCTTATACG
GGCGCAGCTCTAGCTGAATATTTTATGTACCGTGAACGACACACTTTAAT
CATTTATGATGATCTCTCCAAACAAGCACAGGCTTATCGACAAATGTCTC
TTCTATTACGAAGACCACCGGGTCGCGAAGCTTATCCCGGAGATGTTTTT
TATTTGCATTCACGACTTTTGGAAAGAGCCGCGAAATTAGGTTCGCAGTT
AGGCGAAGGAAGTATGACCGCTTTACCAATAGTTGAGACCCAGTCGGGAG
ATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGACGGGCAA
ATATTCTTATCCGCGGATTTATTCAATGCTGGAATCAGACCCGCTATTAA
TGTGGGTATTTCCGTCTCTCGAGTAGGATCCGCAGCTCAAATTAAAGCTA
TGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCACAATTCGCAGAA
TTAGAAGCCTTTGCACAATTTGCTTCTGATCTCGATAAAGCTACTCAGAA
CCAATTGGCAAGGGGTCAACGCTTACGTGAGTTGCTCAAACAGGCCCAAG
CAGCCCCTCTCACGGTGGAAGAACAGATAATGACTATTTATACAGGAACG
AATGGGTATCTTGATTCATTAGAAATTGGTCAAGTAAGAAAA
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