CK740186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.378e-42 Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K V VGDGA GKTC+LI ++ TFP YVPTVF+N+ A+V VDG V L LWDTAGQEDY+RLRPLSY + V L+ F++ S S +NV +KWI E+ H+ +PI+LV K DLR+D + + + P+TT +G+ + + IGA Y+ECS+KT + V+ VF+ Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFE 173
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RACD_DICDI (Rho-related protein racD OS=Dictyostelium discoideum GN=racD PE=2 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 3.106e-42 Identity = 85/166 (51.20%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLA--DHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 +K V VGDGAVGKT +LI YT+ FP DYVPTVFDNF+ + D VNL LWDTAGQEDY+ LRPLSY DVF++ +S++ + S +N+ KW+PE+ G PIILVGTK DLR+DK+ L+ P++ +G L K IGA + ECS+ T V +F Sbjct: 9 VKVVVVGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSALTGNGVNDIF 174
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.629e-41 Identity = 83/166 (50.00%), Postives = 114/166 (68.67%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K V VGDGA GKTC+LI ++ TFP YVPTVF+N+ A+V VDG + L LWDTAGQEDY+RLRPLSY + V L+ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + + PIT +G+ + + IGA Y+ECS+K + V VF+ Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFE 173
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.305e-40 Identity = 80/166 (48.19%), Postives = 114/166 (68.67%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 +K V VGDGAVGKTC+LISY TFPTDY+PT+F+N+ N+ +G + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE++H+ P PI+LVG K DL + AD+ + + + E L K +GA +I+CS++ ++N+ VF+ Sbjct: 73 LKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDL-----YEADNLSDL-VEPSSAESLAKRLGAFAHIQCSARLKENIDEVFE 232
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.797e-40 Identity = 83/166 (50.00%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD--KQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY+RLRPLSY DV L+ FS+ S S EN+ +KW PE++H+ P +PIILVG K D+ ++ LA P+ +E+ I A Y+ECS+KT++ V+ VF+ Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMK-QEPVKPDDAKEMGSRIKAFGYLECSAKTKEGVREVFE 171
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.483e-39 Identity = 80/167 (47.90%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 IK VG+G +GKT ML+SYTSN+ +Y PTVFDN+S ++ + NL LWDTAGQE++++LR LSY DVFLL FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + L +PI+T QG EL K I A ++ECS+ TQ+N+ VF+ Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFE 170
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 9.352e-39 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 92 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGA--VPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 S + +K V VGDG GKT +L+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + L+ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ L A PIT QG+ + I A +Y+ECS+K ++NV+ VF Sbjct: 19 SGRKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAKFRENVEDVF 189
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38 Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 2 Query: 101 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ+DY+RLRPL Y A V LL F + S S++N+ +W PE+ H+ VPII+VG K DL DK + G P+T +G+E+ + +GA Y+ECS++ NV AVF Sbjct: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38 Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 101 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDDK---QFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 ++IK V GDGAVGKT +LI++ S FP DY PTVFDNFS + NLGL+DTAGQED++RLRPL Y D+FL+ +S+I+ SY NV KW E++ Y +P+ILVGT+ DLR DK + LA A PI+ +G +RK IGA + ECS + +NVK VF+ Sbjct: 2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQA-PISYEEGMMMRKRIGAKAFTECSVVSGKNVKQVFE 171
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.083e-38 Identity = 73/166 (43.98%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 +K V VGDG GKT +++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V LL F + + S++NV+ +W PE+ H+ GVPII+VG K+DLR DK + + P+T +G ++ + +GA Y+ECS++ NV+AVF Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVF 183 The following BLAST results are available for this feature:
BLAST of CK740186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740186 ID=CK740186; Name=CK740186; organism=Citrus sinensis; type=EST; length=603bpback to top |