CK740186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 101 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 R K V +G G VGK+ + + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VP+ILVG K DL D++ + QG+ L + ++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYAEDNSL---LFMETSAKTAMNVNEIF 175
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ I T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VIPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 51/170 (30.00%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 95 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ EL+ + P + + + G K DL D ++ VP+ A +E + IGA + +E S+K N++ +F Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-IVVETSAKNAINIEELF 159
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K V +G+ VGKTC++ +T FP T+ +F V ++G V L +WDTAGQE + + YR A+ +L + + + S+ +W+ E+ YA V +LVG K+DL + ++ ++ + EE + Y+E S+K NV+ +F Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKVITVLVGNKIDLAERRE----------VSQQRAEEFSEAQDM-YYLETSAKESDNVEKLF 163
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K V +G+ VGKTC++ +T FP T+ +F V ++G V L +WDTAGQE + + YR A+ +L + + + S+ +W+ E+ YA V +LVG K+DL + ++ ++ + EE + Y+E S+K NV+ +F Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKVITVLVGNKIDLAERRE----------VSQQRAEEFSEAQDM-YYLETSAKESDNVEKLF 163 The following BLAST results are available for this feature:
BLAST of CK740186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740186 ID=CK740186; Name=CK740186; organism=Citrus sinensis; type=EST; length=603bpback to top |