CK740186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYADDNSL---LFMETSAKTAMNVNEIF 175
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 52/170 (30.59%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 95 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ EL+ + P + + + G K DL D ++ VP+ A +E + IGA V +E S+K N++ +F Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGALV-VETSAKNAINIEELF 159
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 46/168 (27.38%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 601 +K + +G+ VGK+ +++ + + F + T+ +F ++ +DG+ V L +WDTAGQE + L P YRGA + + + S++S+E + K W+ E+ Y +I +V K+D+ + +T +G + K ++IE S+KT++ V+ F+ Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-KHWMTEVDTYCTNDNVIKMMVANKIDMPNR-----------TVTREEGLKFAKR-HRTLFIEASAKTKEGVQCTFE 166
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 598 ++ + +G VGKT ++ +T +TF TV +F V + G + L +WDTAGQE +N + YR A +L + + K +++++ KW+ + YA ++LVG KLD D++ IT QGE+ + I + E S+K NV +F Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 457 K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQE Y + YRGA LL + + +++ENV + W+ ELR H P + ++LVG K DLR Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: YPT10_YEAST (GTP-binding protein YPT10 OS=Saccharomyces cerevisiae GN=YPT10 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.606e-14 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 107 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV----DGST---VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQN 583 IK V +GD +VGKT ++ S F + T+ F + D ST +++ +WDTAGQE Y L P+ YR A++ L+ F L +S + AK W +L+ A G +I+VG K DL +H G V I +L G P Y+ S+KT N Sbjct: 5 IKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQ-CAKTWFQDLQDRAQGTQVIIVGNKYDL-----VCEEHSGEVTIPA-------ELQGLP-YVAVSAKTGYN 156
BLAST of CK740186 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.606e-14 Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 110 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR-------DDKQFLADHPG 490 K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQE Y + YRGA LL + + + +++NV ++W+ ELR +A + I++ G K DL+ +D Q LA+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEG 148 The following BLAST results are available for this feature:
BLAST of CK740186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740186 ID=CK740186; Name=CK740186; organism=Citrus sinensis; type=EST; length=603bpback to top |