CK740187

Overview
NameCK740187
Unique NameCK740187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length493
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 6.848e-19
Identity = 53/101 (52.48%), Postives = 65/101 (64.36%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  TG GINPARS G+AVI +    + D W+FWVGPFIG A+A   + FIL
Sbjct:  140 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-19
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  140 GLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 1.168e-18
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  140 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 9.889e-18
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  138 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 9.889e-18
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  138 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17
Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG+A+A   + FIL
Sbjct:  138 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17
Identity = 51/101 (50.50%), Postives = 63/101 (62.38%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARS G++VI +  K   D W+FWVGPFIG A+A   + FIL
Sbjct:  140 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17
Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 307
            GL +EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG A+A   + FIL
Sbjct:  138 GLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 304
            GL VE+I TF LV+T+F++ D KR+     V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  159 GLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 251          
BLAST of CK740187 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 2
Query:    5 GLAVEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 304
            GL VE+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  162 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254          
The following BLAST results are available for this feature:
BLAST of CK740187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
AQP1_PIG6.848e-1952.48Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP8.944e-1951.49Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.168e-1851.49Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB9.889e-1850.50Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN9.889e-1850.50Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT1.292e-1749.50Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA1.292e-1750.50Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.687e-1749.50Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP4_RAT2.436e-1644.00Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL3.181e-1643.00Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6682 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740187 ID=CK740187; Name=CK740187; organism=Citrus sinensis; type=EST; length=493bp
CGTTGGATTGGCCGTCGAGATCATCGGCACCTTTGTGTTGGTTTACACTG
TCTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCC
GTTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGC
CACAATCCCAATCACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGG
CCGCTGTTATTTACAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTC
TGGGTTGGACCCTTCATCGGTGCAGCAATTGCGGCTTTCTACCACCAATT
CATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAAT
CCCGTGTCTGATTTTAGTTTCGACAAGTGGATTATCCACATCTTCATGGG
GTTAATGATTTAAAATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTG
TTAAGTTTCAAAAAGTGAATAATGAGGGGGGGGTGGTGATTTG
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