CK740203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H31_CHLRE (Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=ch3-I PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.204e-43 Identity = 92/113 (81.42%), Postives = 95/113 (84.07%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTEL+IRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 24 KAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H33_CHLRE (Histone H3 type 3 OS=Chlamydomonas reinhardtii GN=ch3-IV PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 7.804e-43 Identity = 92/113 (81.42%), Postives = 94/113 (83.19%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAI AKRVTIMPKDIQLARRIRGERA Sbjct: 24 KAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVVALQEAAEAYLVGLFEDTNLCAITAKRVTIMPKDIQLARRIRGERA 135
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H31_SCHPO (Histone H3.1/H3.2 OS=Schizosaccharomyces pombe GN=hht1 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 7.804e-43 Identity = 87/113 (76.99%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARK+APATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF LFEDTNLCAIH KRVTI PKD+QLARR+RGER+ Sbjct: 24 KAARKAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRGERS 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H31_LODEL (Histone H3.1/H3.2 OS=Lodderomyces elongisporus GN=HHT1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.331e-42 Identity = 87/113 (76.99%), Postives = 94/113 (83.19%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTI KDIQLARR+RGER+ Sbjct: 24 KAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H32_CICIN (Histone H3.2 OS=Cichorium intybus PE=2 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 1.738e-42 Identity = 90/113 (79.65%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KA A ATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA Sbjct: 24 KAWNTLATATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H3_MORAP (Histone H3 OS=Mortierella alpina GN=H3.1 PE=3 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.965e-42 Identity = 88/112 (78.57%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 338 KAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF LFEDTNL AIHAKRVTI PKDI LARR+RGER Sbjct: 24 KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEASEAYLVSLFEDTNLAAIHAKRVTIQPKDIHLARRLRGER 135
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H31_CANAL (Histone H3.1/H3.2 OS=Candida albicans GN=HHT1 PE=3 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.965e-42 Identity = 86/113 (76.11%), Postives = 94/113 (83.19%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTI KD+QLARR+RGER+ Sbjct: 24 KAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDMQLARRLRGERS 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H33_SCHPO (Histone H3.3 OS=Schizosaccharomyces pombe GN=hht3 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 6.606e-42 Identity = 86/113 (76.11%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARK+APATGGVKKPHR+RP TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF LFEDTNLCAIH KRVTI PKD+QLARR+RGER+ Sbjct: 24 KAARKAAPATGGVKKPHRYRPPTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRGERS 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 6.606e-42 Identity = 88/113 (77.88%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARKSA TG VKK HRFRPGTVALREIR+YQKSTELL+RKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 24 KAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of CK740203 vs. ExPASy Swiss-Prot
Match: H31_PICST (Histone H3.1/H3.2 OS=Pichia stipitis GN=HHT1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.606e-42 Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 3 KAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 341 KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF LFEDTNLCAIHAKRVTI KDIQLARR+RGER+ Sbjct: 24 KAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136 The following BLAST results are available for this feature:
BLAST of CK740203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740203 ID=CK740203; Name=CK740203; organism=Citrus sinensis; type=EST; length=470bpback to top |