CK740205

Overview
NameCK740205
Unique NameCK740205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12
Identity = 45/156 (28.85%), Postives = 72/156 (46.15%), Query Frame = 2
Query:  101 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            A+I  P  L+  V+E  S  + VF   G+   Y    D         +  S+A    + V +    +ISG H+NPAVT    V  H  +++   YW AQ  GS+ A  +LK     +        +G   W+++V EI++TF +++   A A D +
Sbjct:   38 ADIFPPHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDR-----ISQLGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTG-PHWHSLVIEIIVTFNMMFVTLAVATDTR 187          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12
Identity = 42/147 (28.57%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKF-----STGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 553
            +A  AEF + +IFVF G GS + +             ++  SIA   A+         +SGGH+NPA+T    +G  I+ +R++ Y  AQL+G++    +L +     + G L  +  AL++      A+V E+++TF L   ++++
Sbjct:   12 KAVFAEFLATLIFVFFGLGSALKWPSALPT-------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVN--ALNNNTTPGKAMVVELILTFQLALCIFSS 149          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.916e-12
Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  125 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            ++  V E     +F+F G  S      + +N   T  GL+  ++AH  AL + ++   NISGGH NPAV+    + G +  +  I YW++QL G ++   L K  +          +AFA+         A+  EIVMT  LV  V   AV+ K
Sbjct:   37 IQPCVVELLGSALFIFIGCLS------VIENSPNT--GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK 182          

HSP 2 Score: 27.7202 bits (60), Expect = 4.916e-12
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            +ILAGG   GA MNPA +F
Sbjct:  199 DILAGGGISGACMNPARAF 217          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.293e-12
Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  125 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            ++  + E     +F+F G  S      + +N   T  GL+  ++AH  AL + ++   NISGGH NPAV+    V G +  +  I YWI+QL G ++   L K  +          +AFA+         A+  EI++T  LV  V   AV+ K
Sbjct:   35 VQPCIVELVGSALFIFIGCLS------VIENSPNT--GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK 180          

HSP 2 Score: 28.1054 bits (61), Expect = 8.293e-12
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            +ILAGG+  GA MNPA +F
Sbjct:  197 DILAGGSISGACMNPARAF 215          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.077e-11
Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  125 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            ++  V E     +F+F G  S      + +N   T  GL+  ++AH  AL + ++   NISGGH NPAV+    V G +  +  I YWI+Q+ G ++   L K  +          +AFA+         A+  EI++T  LV  V   AV+ K
Sbjct:   35 IQPCVVELLGSALFIFIGCLS------VIENSPDT--GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMGAVNEK 180          

HSP 2 Score: 27.7202 bits (60), Expect = 1.077e-11
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            +ILAGG   GA MNPA +F
Sbjct:  197 DILAGGGISGACMNPARAF 215          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11
Identity = 41/146 (28.08%), Postives = 75/146 (51.37%), Query Frame = 2
Query:  125 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVV-ACLLLKFSTGGL--ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 553
            L+A  AEF + +IFVF G  S + +             ++  ++A   A+         +SGGH+NPA+T    VG  I+ +R++ Y +AQL+G++  A +L   + G      +  +L++      AVV E+++TF L   ++++
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKWPSALPT-------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSS 149          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11
Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 2
Query:  125 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 553
            L+A  AEF + +IFVF G GS + +             ++  ++A   A+         +SGGH+NPA+T    VG  I+ +R+  Y  AQL+G++    +L +    L      +  AL++      A+V E+++TF L   ++A+
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKWPSALPT-------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL-YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS 149          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_DASNO (Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSA-SIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA +AEF + +IFVF G GS +++          P  L S   IA AF L +   V A  ++SG H+NPAVT    VG H++F+R+  Y  AQLLG+V    +L
Sbjct:    6 RAVLAEFLATLIFVFFGLGSALSW----------PQALPSVLQIALAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA  AEF + +IFVF G GS + + +      + P+ L    IA AF L +   V A  +ISG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFAEFLATLIFVFFGLGSALNWQQ------SLPSVL---QIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            +A  +EF + ++FVF G GS + + +        P+GL  A +A   A+   V    +ISG H+NPAVT    VG H++F+R+I Y  AQLLG+V    LL
Sbjct:    6 KAVFSEFLATLLFVFFGLGSALNWPQ------ALPSGLQIA-MAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of CK740205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
NIP21_MAIZE4.217e-1228.85Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
AQP5_RAT4.217e-1228.57Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP8_RAT4.916e-1231.17Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
AQP8_MOUSE8.293e-1230.52Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP8_NOTAL1.077e-1130.52Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP5_PIG1.227e-1128.08Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_HUMAN1.227e-1128.57Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP2_DASNO1.227e-1141.35Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=... [more]
AQP2_TALEU1.603e-1142.72Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_ORYAF1.603e-1139.60Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6700 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740205 ID=CK740205; Name=CK740205; organism=Citrus sinensis; type=EST; length=679bp
AGTAATTGTAGTTTGGCTATTATAAGCTCTAGAGCTCGAAGCTAAAACTA
AAACTTGCCAAGAAAATTAAAAAATGCCCGGAATTGCTATCGGAAACCCG
GCTGAGATCGGCCAGCCCGATGCCCTTAGGGCGGCTGTCGCTGAGTTTTT
CTCCATGGTCATTTTTGTTTTTGCCGGCCAAGGGTCTGGCATGGCTTACA
GCAAGCTCACGGACAATGGAGCAACAACACCAGCAGGTCTAGTGTCAGCA
TCAATAGCTCATGCATTTGCCCTCTTCGTGGCAGTTTCTGTTGGCGCCAA
CATCTCCGGTGGACACGTGAACCCCGCTGTTACTTTCGGTGCCTTTGTTG
GCGGCCACATTACATTTGTCAGGAGTATTTTGTACTGGATTGCCCAGTTA
CTCGGATCTGTTGTTGCTTGCTTGCTTCTCAAGTTCTCCACTGGTGGATT
GGAAACATCTGCTTTTGCCCTGTCATCTGGAGTTGGTGCATGGAATGCAG
TTGTGTTTGAGATTGTGATGACCTTTGGACTGGTCTACACGGTGTATGCC
ACAGCTGTTGACCCAAAGAGGGGAACATTGGCATCATTGCACCAATTGCA
ATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGGTGGTGCCTTTGATGG
TGCATCGATGAACCCTGCAGTTTCCTTTG
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