CK740205

Overview
NameCK740205
Unique NameCK740205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11
Identity = 36/101 (35.64%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA ++EF + ++FVF G GS + + +   +       ++  ++A   A+   V    +ISG H+NPAVT    VG H++F+R++ Y  AQLLG+V    LL
Sbjct:    6 RAVLSEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSA-SIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA  AEF + ++FVF G GS + +          P+ L S   IA AF L +   V A  ++SG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFAEFLATLLFVFFGLGSALNW----------PSALPSTLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 54/167 (32.34%), Postives = 78/167 (46.71%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----------AGL---VSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL-------KFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            +  +AEF    I VF G GS  A + +  +G T+P           GL   V+  +A  FA+  ++    NISG H+NPAVT G +          + Y IAQLLG+     +          + GGL   A A   G+  W A++ E+V TF L+ T+   AVD +
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGL--GATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER 169          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA +AEF + ++FVF G GS + + +        P+ L    IA AF L +   V A  ++SG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVLAEFLATLLFVFFGLGSALNWPQ------AMPSVL---QIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 43/160 (26.88%), Postives = 76/160 (47.50%), Query Frame = 2
Query:  101 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYS----KLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            A+I  P+ L+  ++E  +  + VF   G+   Y     +++  G +   GL+         + V +    +ISG H+NPAVT       H  +++   YW AQ  G++ A  +L+     +E       +G   W+A+V EIV+TF +++   A A D +
Sbjct:   43 ADIFPPNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLI---------VTVMIYATGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTG-PHWHALVIEIVVTFNMMFVTCAVATDSR 192          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 48/176 (27.27%), Postives = 84/176 (47.73%), Query Frame = 2
Query:   62 EN*KMPGIAIGNPA--EIGQPDALRAAVAEFFSMVIFVFAGQG----SGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATAVDPK 568
            +N  MP +  G  A  +   P  L+  V+E  +  + VF   G    SG   S+++  G +   GL+   + +A           +ISG H+NPAVT    V  H  +++   YW AQ  G++ A  +LK     ++      ++ VG  W+++V E+++TF +++   A A D +
Sbjct:   25 QNGTMPTMYYGEKAIADFFPPHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVD--VIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR 189          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_MACPR (Aquaporin-2 (Fragment) OS=Macroscelides proboscideus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLV-SASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA  +EF + ++FVF G GS + +       +T P   V   S+A   A+   V    +ISG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFSEFLATLLFVFFGLGSALNWP------STVPIPTVLQISMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYVAAQLLGAVAGAALL 101          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP2_CANFA (Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSA-SIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 430
            RA  AEF + ++FVF G GS + +          P  L S   IA AF L +   V A  ++SG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFAEFLATLLFVFFGLGSALNW----------PQALPSVLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 44/156 (28.21%), Postives = 72/156 (46.15%), Query Frame = 2
Query:  101 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            A+I  P   +  ++E  +  + VF   G+   Y +  DN   +  G    S+A    + V +    +ISG H+NPAVT       H  +++   YW AQ  G++ A  +LK     +        SG   W+A+  EIV+TF +++   A A D +
Sbjct:   46 ADIFPPHLGKKVISEVVATFLLVFVTCGAASIYGE--DNARISQLG---QSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSG-PHWHALAIEIVVTFNMMFVTCAVATDSR 195          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 44/156 (28.21%), Postives = 73/156 (46.79%), Query Frame = 2
Query:  101 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 568
            A+I  P   +  ++E  +  + VF   G+   Y +  DN   +  G    S+A    + V +    +ISG H+NPAVT       H  +++   YW AQ  G++ A  +LK     +        SG   W+A++ EIV+TF +++   A A D +
Sbjct:   43 ADIFPPHLGKKVISEVVATFLLVFVTCGAASIYGE--DNRRISQLG---QSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSG-PHWHALLIEIVVTFNMMFVTCAVATDSR 192          
The following BLAST results are available for this feature:
BLAST of CK740205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AQP2_PROHA2.093e-1135.64Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_RABIT2.734e-1141.35Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
AQPM_METTM3.570e-1132.34Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQP2_HORSE3.570e-1140.78Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
NIP22_ORYSJ4.663e-1126.88Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP21_ORYSJ4.663e-1127.27Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
AQP2_MACPR4.663e-1139.22Aquaporin-2 (Fragment) OS=Macroscelides proboscide... [more]
AQP2_CANFA4.663e-1141.35Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2... [more]
NIP23_MAIZE6.090e-1128.21Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
NIP22_MAIZE7.954e-1128.21Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6700 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740205 ID=CK740205; Name=CK740205; organism=Citrus sinensis; type=EST; length=679bp
AGTAATTGTAGTTTGGCTATTATAAGCTCTAGAGCTCGAAGCTAAAACTA
AAACTTGCCAAGAAAATTAAAAAATGCCCGGAATTGCTATCGGAAACCCG
GCTGAGATCGGCCAGCCCGATGCCCTTAGGGCGGCTGTCGCTGAGTTTTT
CTCCATGGTCATTTTTGTTTTTGCCGGCCAAGGGTCTGGCATGGCTTACA
GCAAGCTCACGGACAATGGAGCAACAACACCAGCAGGTCTAGTGTCAGCA
TCAATAGCTCATGCATTTGCCCTCTTCGTGGCAGTTTCTGTTGGCGCCAA
CATCTCCGGTGGACACGTGAACCCCGCTGTTACTTTCGGTGCCTTTGTTG
GCGGCCACATTACATTTGTCAGGAGTATTTTGTACTGGATTGCCCAGTTA
CTCGGATCTGTTGTTGCTTGCTTGCTTCTCAAGTTCTCCACTGGTGGATT
GGAAACATCTGCTTTTGCCCTGTCATCTGGAGTTGGTGCATGGAATGCAG
TTGTGTTTGAGATTGTGATGACCTTTGGACTGGTCTACACGGTGTATGCC
ACAGCTGTTGACCCAAAGAGGGGAACATTGGCATCATTGCACCAATTGCA
ATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGGTGGTGCCTTTGATGG
TGCATCGATGAACCCTGCAGTTTCCTTTG
back to top