CK740205

Overview
NameCK740205
Unique NameCK740205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.743e-50
Identity = 87/163 (53.37%), Postives = 119/163 (73.01%), Query Frame = 2
Query:   86 AIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG 574
            + G   E   PD++RA++AEF S  IFVFAG+GSG+A  K+  + A +   L++ ++AHAFALF AVS   ++SGGHVNPAV+FGA +GG I+ +R++ YWIAQLLGS+VA L+L+  T  +  S F +S GVG  +  + E+VMTFGL+YTVY TA+DPKRG
Sbjct:    7 SFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRG 169          

HSP 2 Score: 34.2686 bits (77), Expect = 7.743e-50
Identity = 17/39 (43.59%), Postives = 19/39 (48.72%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK G                NIL GG FDGA MNPA++F
Sbjct:  166 PKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAF 204          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.009e-49
Identity = 87/167 (52.10%), Postives = 117/167 (70.06%), Query Frame = 2
Query:   92 GNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKL-----TDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGT 577
            G   E   PD++RA +AEF S  +FVFAG+GS +A  KL        G  TP GLV  ++AHA ALF AVS   N+SGGHVNPAVTF A +GG I+ +R+I YW+AQL+G+++ACLLL+ +T GL    F ++SGV   + ++ EI++TF LVY VY+TA+DPKRG+
Sbjct:   12 GRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS 178          

HSP 2 Score: 35.8094 bits (81), Expect = 1.009e-49
Identity = 18/39 (46.15%), Postives = 20/39 (51.28%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK G+               NIL GG FDGASMNPA +F
Sbjct:  174 PKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAF 212          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 1.010e-49
Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 2
Query:   74 MPGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGT 577
            M  +A G+  +     +L+A VAEF + ++FVFAG GS +AYS+LT  GA  PAGLV+ +IAHAFALFV VS+ ANISGGH+NPAVTFG  VGGHIT +  ILYW+AQLLG+ VAC LL++ T G       + SG+     VV EIV+TF LVYTVYATA DPK+G+
Sbjct:    1 MVKLAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGV-SGISEIEGVVMEIVITFALVYTVYATAADPKKGS 167          

HSP 2 Score: 32.7278 bits (73), Expect = 1.010e-49
Identity = 17/39 (43.59%), Postives = 19/39 (48.72%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK+G+               NILA G F G SMNPA SF
Sbjct:  163 PKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSF 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.316e-49
Identity = 95/168 (56.55%), Postives = 120/168 (71.43%), Query Frame = 2
Query:   74 MPGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGT 577
            M  +A G+  +     +++A VAEF + ++FVFAG GS +AY +LT+ GA  PAGLV+ +IAHA ALFV VSV ANISGGH+NPAVTFG  VGGHIT +  + YWIAQLLG+ +ACLLLKF T G       + +G+     VV EIV+TF LVYTVYATA DPK+G+
Sbjct:    1 MVKLAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGV-AGISELEGVVMEIVITFALVYTVYATAADPKKGS 167          

HSP 2 Score: 32.7278 bits (73), Expect = 1.316e-49
Identity = 17/39 (43.59%), Postives = 19/39 (48.72%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK+G+               NILA G F G SMNPA SF
Sbjct:  163 PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.795e-49
Identity = 90/164 (54.88%), Postives = 117/164 (71.34%), Query Frame = 2
Query:   89 IGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAT--TPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG 574
            +G   +   PD +RAA++EF +  IFVFA +GS ++  K+  + +T  T  GLV+ ++AHA  L VAV+V  N+SGGHVNPAVTFGA VGG ++ VR++LYW AQLLG+V A LLL+ +TGG     FAL+SGVG  +AV+ E VMTFG VY  YAT VDPKRG
Sbjct:   15 VGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG 178          

HSP 2 Score: 34.2686 bits (77), Expect = 3.795e-49
Identity = 17/39 (43.59%), Postives = 19/39 (48.72%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK G+               N+LAGG FDGA MNPA  F
Sbjct:  175 PKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVF 213          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.412e-49
Identity = 94/165 (56.97%), Postives = 120/165 (72.73%), Query Frame = 2
Query:   83 IAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGT 577
            IA G   +     +L+A VAEF S ++FVFAG GS +AY+KLT      PAGLV+ ++ H F LFVAV++GANISGGHVNPAVTFG  +GG IT +  + YWIAQLLG++V  +L++F T G+ T    L SGVGA+  VV EI++TFGLVYTVYATA DPK+G+
Sbjct:    5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGL-SGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS 167          

HSP 2 Score: 31.187 bits (69), Expect = 8.412e-49
Identity = 16/39 (41.03%), Postives = 18/39 (46.15%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK+G+               NIL  G F G SMNPA SF
Sbjct:  163 PKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSF 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 6.863e-45
Identity = 81/168 (48.21%), Postives = 112/168 (66.67%), Query Frame = 2
Query:   74 MPGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGT 577
            M  I +G+ +E  +PD ++A + EF +  +FVFAG GS MA   L  N   T  GL + ++AHAF + V +S G +ISGGH+NPAVT G  +GGHI+  R+ LYWI QLL S  AC LL + TGG+ T    L+SGV     +++EI++TF L++TVYAT VDPK+G+
Sbjct:    1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGN---TLVGLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGS 164          

HSP 2 Score: 38.5058 bits (88), Expect = 6.863e-45
Identity = 20/39 (51.28%), Postives = 22/39 (56.41%), Query Frame = 1
Query:  562 PKEGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAVSF 678
            PK+G+               NILAGGAF GASMNPA SF
Sbjct:  160 PKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSF 198          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.089e-40
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 2
Query:  116 PDALRAAVAEFFSMVIFVFAGQGSGMAYSKL-TDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG 574
            P A RAA++EF +  +FVFA +GS     K+  D G  T  GL+  ++AHA AL  AV+V  N SGGHVNPAVTFG  VG  I+F R+ LYW AQLLG+V+A LLL+ ++GG+    F L   +   +A++ E+VMTFGLVYTVYATAVD + G
Sbjct:   25 PGATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTG--TLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSG 176          

HSP 2 Score: 34.6538 bits (78), Expect = 2.089e-40
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            NILAGG FDGA+MNPA +F
Sbjct:  192 NILAGGPFDGAAMNPARAF 210          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.519e-39
Identity = 85/167 (50.90%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   74 MPGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE-TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            M  +A+G+  E   P  LRA VAE     +FVF+G GS MA +KL   G  T  GL + + AHA  + V VS G ++SGGH+NPAVT G   GGHIT  RS LY  AQLLGS +ACLLL   TGG E     A + GVGA  AV  E V+TF L++ VYAT VD +R
Sbjct:    1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKL-GGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR 166          

HSP 2 Score: 33.4982 bits (75), Expect = 6.519e-39
Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            NILAGG + GASMNPA SF
Sbjct:  183 NILAGGPYSGASMNPARSF 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.048e-38
Identity = 78/167 (46.71%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   74 MPGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKF-STGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            M   A+G+  E      +RA +AE     +FVFAG GS MA  KL   G  T  GL + ++AH   + V VS G ++SGGH+NPAVT G    G IT  RS LY  AQLLGS +ACLLL F +         AL +GVGA   V+ E V+TF L++ VYAT VDP+R
Sbjct:    1 MAKFALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR 167          

HSP 2 Score: 34.2686 bits (77), Expect = 7.048e-38
Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  622 NILAGGAFDGASMNPAVSF 678
            N+LAGG F GASMNPA SF
Sbjct:  184 NVLAGGPFSGASMNPARSF 202          
The following BLAST results are available for this feature:
BLAST of CK740205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
TIPA_PHAVU7.743e-5053.37Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP32_ARATH1.009e-4952.10Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP23_MAIZE1.010e-4957.74Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ORYSJ1.316e-4956.55Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP32_MAIZE3.795e-4954.88Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP22_ORYSJ8.412e-4956.97Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH6.863e-4548.21Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_ORYSJ2.089e-4052.60Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP43_ORYSJ6.519e-3950.90Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP44_MAIZE7.048e-3846.71Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6700 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740205 ID=CK740205; Name=CK740205; organism=Citrus sinensis; type=EST; length=679bp
AGTAATTGTAGTTTGGCTATTATAAGCTCTAGAGCTCGAAGCTAAAACTA
AAACTTGCCAAGAAAATTAAAAAATGCCCGGAATTGCTATCGGAAACCCG
GCTGAGATCGGCCAGCCCGATGCCCTTAGGGCGGCTGTCGCTGAGTTTTT
CTCCATGGTCATTTTTGTTTTTGCCGGCCAAGGGTCTGGCATGGCTTACA
GCAAGCTCACGGACAATGGAGCAACAACACCAGCAGGTCTAGTGTCAGCA
TCAATAGCTCATGCATTTGCCCTCTTCGTGGCAGTTTCTGTTGGCGCCAA
CATCTCCGGTGGACACGTGAACCCCGCTGTTACTTTCGGTGCCTTTGTTG
GCGGCCACATTACATTTGTCAGGAGTATTTTGTACTGGATTGCCCAGTTA
CTCGGATCTGTTGTTGCTTGCTTGCTTCTCAAGTTCTCCACTGGTGGATT
GGAAACATCTGCTTTTGCCCTGTCATCTGGAGTTGGTGCATGGAATGCAG
TTGTGTTTGAGATTGTGATGACCTTTGGACTGGTCTACACGGTGTATGCC
ACAGCTGTTGACCCAAAGAGGGGAACATTGGCATCATTGCACCAATTGCA
ATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGGTGGTGCCTTTGATGG
TGCATCGATGAACCCTGCAGTTTCCTTTG
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