CK740205

Overview
NameCK740205
Unique NameCK740205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPA---GLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   + + AE+G     RA +AEF + ++F++    + + Y   TD   +GA   A   G+    IA AF   +FV V   A ISGGH+NPAVTFG F+   ++ VR++LY +AQ LG+V    L+K F +   +     A +L+SG      +  EIV TF LVYTV+ +A DPKR
Sbjct:   25 PPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVF-SATDPKR 200          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20
Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPAGLVSA-SIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   + + AE+G     RA +AEF + ++F++    + + Y   TD   +GA    G V    IA AF   +FV V   A ISGGH+NPAVTFG F+   ++ VR++LY +AQ LG++    L+K F +   +     A +L+SG      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   25 PPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVF-SATDPKR 198          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 2
Query:  104 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETS--------AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            E+G+    RA +AEF + ++F++    + + Y   TD  A+       G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR+ILY +AQ LG+V    L+K    G ++S        A  L++G      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   28 ELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVK----GFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 192          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19
Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  104 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAT----TPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            E+G+    RA +AEF + ++F++    + + Y   TD        T  G++  + A    +F+ V   A ISGGH+NPAVTFG  +   +T VR+++Y +AQ LG++    L+K       T     A  LS G      V  EI+ TF LVYTV+ +A DPKR
Sbjct:   30 ELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKR 192          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  104 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            E+ Q    RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR++LY IAQ LG++    L+K    G +++ +         LS G      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 197          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 2
Query:   98 PAEIGQPDAL------RAAVAEFFSMVIFVFAGQGSGMAYSKLTDN---GATTPAGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAF--------ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            PA +  PD L      RAA+AEF + ++F++    + + Y + +D    G T   G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+G  ++ VR++LY IAQ  G++    L K    G + S +         +S G     A+  EI+ TF LVYTV+ +A DPKR
Sbjct:   24 PAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAK----GFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVF-SATDPKR 195          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 2
Query:  104 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPAGLVSA-SIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            E+G+    RA +AEF + ++F++    + + Y   TD   NGA    G V    IA AF   +F+ V   A +SGGH+NPAVT G F+   ++ VR++LY  AQ LG++    L+K     L       A  L++G      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   31 ELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKR 195          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18
Identity = 61/162 (37.65%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR++LY IAQ LG++    L+K    G +++ +         LS G      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   42 RAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 198          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 61/175 (34.86%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   + +  E+ +    RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A +SGGH+NPAVTFG F+   ++ VR++LY +AQ LG++    L+K             A  LS+G      +  EI+ TF LVYTV+ +A DPKR
Sbjct:   20 PPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 193          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAY-SKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSV----VACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   + + +E+G+    RA +AEF + +IF++    + + Y ++     A T  G +  + +    +FV V     +SGGH+NPAVT G F G  ++ VR++LY +AQ LG++    +   ++K     L   A  +S G  A  A+  EIV TF LVYTV+ +A DPKR
Sbjct:   27 PPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVF-SATDPKR 195          
The following BLAST results are available for this feature:
BLAST of CK740205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
PIP22_MAIZE9.374e-2038.98Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_MAIZE9.374e-2038.29Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_ORYSJ2.727e-1937.65Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ARATH2.727e-1935.98Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE3.562e-1937.06Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP27_MAIZE6.076e-1937.85Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP24_ORYSJ6.076e-1937.35Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_MAIZE1.036e-1837.65Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP25_MAIZE1.354e-1834.86Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP27_ORYSJ2.309e-1834.71Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6700 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740205 ID=CK740205; Name=CK740205; organism=Citrus sinensis; type=EST; length=679bp
AGTAATTGTAGTTTGGCTATTATAAGCTCTAGAGCTCGAAGCTAAAACTA
AAACTTGCCAAGAAAATTAAAAAATGCCCGGAATTGCTATCGGAAACCCG
GCTGAGATCGGCCAGCCCGATGCCCTTAGGGCGGCTGTCGCTGAGTTTTT
CTCCATGGTCATTTTTGTTTTTGCCGGCCAAGGGTCTGGCATGGCTTACA
GCAAGCTCACGGACAATGGAGCAACAACACCAGCAGGTCTAGTGTCAGCA
TCAATAGCTCATGCATTTGCCCTCTTCGTGGCAGTTTCTGTTGGCGCCAA
CATCTCCGGTGGACACGTGAACCCCGCTGTTACTTTCGGTGCCTTTGTTG
GCGGCCACATTACATTTGTCAGGAGTATTTTGTACTGGATTGCCCAGTTA
CTCGGATCTGTTGTTGCTTGCTTGCTTCTCAAGTTCTCCACTGGTGGATT
GGAAACATCTGCTTTTGCCCTGTCATCTGGAGTTGGTGCATGGAATGCAG
TTGTGTTTGAGATTGTGATGACCTTTGGACTGGTCTACACGGTGTATGCC
ACAGCTGTTGACCCAAAGAGGGGAACATTGGCATCATTGCACCAATTGCA
ATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGGTGGTGCCTTTGATGG
TGCATCGATGAACCCTGCAGTTTCCTTTG
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