CK740205

Overview
NameCK740205
Unique NameCK740205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG 574
            RA  AEFF+ + +VF G GS + +       A  P  ++  ++A   AL   V    +ISG HVNPAVTF   VG  ++ +R+  Y  AQLLG+V    +L   T        AL++    V    A   EI +T   V  ++AT  + + G
Sbjct:   11 RAIFAEFFATLFYVFFGLGSSLRW-------APGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNG 155          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 2
Query:   98 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK------FST--GGLETSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P E+      RA +AEF +  +F++    + M   +  +  A+   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K      + T  GG  T A  +   SG+GA      EI+ TF LVYTV+ +A D KR
Sbjct:   42 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKR 200          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13
Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   +   +E+      RA +AEF +  +F++    + M  SK      T   G+   + A    +F  V   A +SGGH+NPAVTFG  +   ++  R++ Y + Q LG+V    ++K     L  S    A A+S G    + +  E+V TF LVYTV+ +A D KR
Sbjct:   43 PAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTV--GIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVF-SATDAKR 208          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13
Identity = 54/170 (31.76%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL-----KFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   +  P+E+      RA +AEF +  +F++    + M   + +    T   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R+I Y + Q+LG++    ++     K   G L   A  ++ G    + +  EIV TF LVYTV+ +A D KR
Sbjct:   38 PPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKR 204          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   +  P E+      RA +AEF +  +F++    + M   +   +   +  G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K F  G    L   A  ++ G    + +  EI+ TF LVYTV+ +A D KR
Sbjct:   36 PPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKR--SDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVF-SATDAKR 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13
Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = 2
Query:   98 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTGGLETS---AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P E+      RA +AEF +  +F++    + M   +  +  A+   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K F  G  +T+   A  ++ G    + +  EIV TF LVYTV+ +A D KR
Sbjct:   43 PGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVF-SATDAKR 201          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13
Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            RA +AEF +  +F++    + M  +K     AT   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y   Q LG++    ++K F  G   G    A A++ G    + +  EIV TF LVYTV+ +A D KR
Sbjct:   54 RAGIAEFVATFLFLYISILTVMGVNKSASKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVF-SATDAKR 202          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.120e-13
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            +A  AEF +M+IFV    GS + +      GA  P  +    I+  F L +A  V    +ISGGH+NPAVT        I+  +S+ Y  AQ LG+++   +L   T     GGL  +   +   + A + ++ E+++TF LV+T++A+  D KR
Sbjct:   36 KAVTAEFLAMLIFVLLSLGSTINWG-----GAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVT--TVHGNLSAGHGLLVELIITFQLVFTIFASC-DSKR 182          

HSP 2 Score: 21.9422 bits (45), Expect = 2.120e-13
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  643 FDGASMNPAVSF 678
            + GASMNPA SF
Sbjct:  207 YTGASMNPARSF 218          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13
Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 2
Query:   77 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK--------FSTGGLETSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            P   +  P E+      RA +AEF +  +F++    + M   +  +  A+   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K           GG  T A  +   SG+GA      EI+ TF LVYTV+ +A D KR
Sbjct:   35 PPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKR 200          
BLAST of CK740205 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.576e-13
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 2
Query:  128 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 571
            +A  AEF + +IFV  G GS + +    +     P  +V  S+    ++   V    +ISGGH+NPAVT        I+  +S+ Y IAQ LG+++   +L   T     GGL  +   +   + A + ++ E+++TF LV+T++A+  D KR
Sbjct:   36 KAVSAEFLATLIFVLLGVGSTINWGGSEN---PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVT--TVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKR 182          

HSP 2 Score: 21.9422 bits (45), Expect = 3.576e-13
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  643 FDGASMNPAVSF 678
            + GASMNPA SF
Sbjct:  207 YTGASMNPARSF 218          
The following BLAST results are available for this feature:
BLAST of CK740205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
MIP_HUMAN5.885e-1433.55Lens fiber major intrinsic protein OS=Homo sapiens... [more]
PIP13_ARATH1.004e-1333.33Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP16_MAIZE1.311e-1331.95Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP2_PEA1.712e-1331.76Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP1_SOLLC1.712e-1330.77Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_ARATH1.712e-1332.72Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ORYSJ1.712e-1334.87Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
AQP4_BOVIN2.120e-1332.90Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
PIP12_ARATH2.921e-1332.00Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
AQP4_MOUSE3.576e-1331.37Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6700 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740205 ID=CK740205; Name=CK740205; organism=Citrus sinensis; type=EST; length=679bp
AGTAATTGTAGTTTGGCTATTATAAGCTCTAGAGCTCGAAGCTAAAACTA
AAACTTGCCAAGAAAATTAAAAAATGCCCGGAATTGCTATCGGAAACCCG
GCTGAGATCGGCCAGCCCGATGCCCTTAGGGCGGCTGTCGCTGAGTTTTT
CTCCATGGTCATTTTTGTTTTTGCCGGCCAAGGGTCTGGCATGGCTTACA
GCAAGCTCACGGACAATGGAGCAACAACACCAGCAGGTCTAGTGTCAGCA
TCAATAGCTCATGCATTTGCCCTCTTCGTGGCAGTTTCTGTTGGCGCCAA
CATCTCCGGTGGACACGTGAACCCCGCTGTTACTTTCGGTGCCTTTGTTG
GCGGCCACATTACATTTGTCAGGAGTATTTTGTACTGGATTGCCCAGTTA
CTCGGATCTGTTGTTGCTTGCTTGCTTCTCAAGTTCTCCACTGGTGGATT
GGAAACATCTGCTTTTGCCCTGTCATCTGGAGTTGGTGCATGGAATGCAG
TTGTGTTTGAGATTGTGATGACCTTTGGACTGGTCTACACGGTGTATGCC
ACAGCTGTTGACCCAAAGAGGGGAACATTGGCATCATTGCACCAATTGCA
ATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGGTGGTGCCTTTGATGG
TGCATCGATGAACCCTGCAGTTTCCTTTG
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