CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.880e-62
Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP N+PKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAER P+P   + G+REK  IEKENNFKQPGERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.207e-62
Identity = 107/135 (79.26%), Postives = 120/135 (88.89%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFFAENE LAF P IVVPG+Y S+DK+LQ RIF+Y D QRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP RHAE+YPIP  V+TG+R+K  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.189e-62
Identity = 107/134 (79.85%), Postives = 116/134 (86.57%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP RHAE+YPIPS V+ GRRE   IEKENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGLYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLNGRREMCVIEKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 5.471e-62
Identity = 104/134 (77.61%), Postives = 119/134 (88.81%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLNKNIDNFFAENE LAF P ++VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++G MNFMHRDEEV+YFPSR+DP RHAER+PIP  V+TG+R++  IEKENNFKQPGERY
Sbjct:  302 PVGRLVLNKNIDNFFAENEQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 5.471e-62
Identity = 104/135 (77.04%), Postives = 120/135 (88.89%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP+RHAERYP P  V +G+RE+  IEKENNFK+PGERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 1.219e-61
Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLN+NIDNFFAENE LAF PG++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL+LP NAPKC H NNHYDG MNFMHR EEVDYFPSRYD  R+A RYPIP+  I GRREK  I KENNFKQPGERY
Sbjct:  300 QPVGRLVLNRNIDNFFAENEQLAFCPGLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCAHHNNHYDGSMNFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERY 434          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.592e-61
Identity = 107/134 (79.85%), Postives = 116/134 (86.57%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP R AE+YPIPS V+TGRREK  I KENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGVYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.592e-61
Identity = 107/134 (79.85%), Postives = 116/134 (86.57%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP R AE+YPIPS V+TGRREK  I KENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGVYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 1.592e-61
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFFAENE LAF PGIVVPG+ YS DK+LQ RIF+Y DTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR DP R+AE +P+PS + +G+REK  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPGIVVPGVSYSEDKLLQTRIFSYSDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 233.032 bits (593), Expect = 3.546e-61
Identity = 103/135 (76.30%), Postives = 119/135 (88.15%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ R+F+Y DTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSRYD  RHAE+YP P  V +G+RE+  IEKENNFK+PGERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERY 435          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA3_SOYBN1.880e-6277.78Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA3_NICPL3.207e-6279.26Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA2_NICPL4.189e-6279.85Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA_SOLAP5.471e-6277.61Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA1_CUCPE5.471e-6277.04Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA2_MAIZE1.219e-6179.26Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA_SOLME1.592e-6179.85Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA_CAPAN1.592e-6179.85Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA1_RICCO1.592e-6178.52Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA2_ARATH3.546e-6176.30Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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