CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16
Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 245
            P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ R+++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  348 PIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDG 426          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERY 413
            VG   LN+N DN+F + E  AF P  +VPGI +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +
Sbjct:  293 VGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENICPFSR---DGQMRILDNNQGGGTHYYPNSDGSFEDQPEFKKPGLKVEGEAYEYDFRQDDDNYFEQPGRLF 433          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERY 413
            VG   LN+N DN+F + E  AF P  +VPGI +S D+MLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +
Sbjct:  293 VGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDRMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRILDNNQGGSTHYYPNSEGAFEDQPEFKKPGLKVEGEAYEYDFREDDDNYFEQPGRLF 433          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 353
            +G++VL++N  N F + + LAF+P  +VPGI  S DK+LQ R+F Y D +R+RLG NY  LPVN PK P  N   DG M   ++   V+Y P+  D         I  D ++G
Sbjct:  291 IGQMVLDENPTNNFEDIQELAFSPANLVPGIEASPDKLLQGRLFGYKDAERYRLGANYEQLPVNRPKVPVHNYERDGAM-AQNQATGVNYEPNSQDGPTEVPAAKIHGDQLSG 402          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 52/137 (37.96%), Postives = 70/137 (51.09%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH-YDGFMNFMHRDEEVDYFPSRYDPTRHAER---YPIPSDVITGRREKACIEKENNFKQPGERY 413
            +G L LN+N +N FAE E   F+P   VPGI  S DKMLQ R+FAYGD  R+R+G N   LPVN P       H  DGF+         +Y P+ +      +R    P P   +TG        ++++F Q G+ Y
Sbjct:  292 IGTLELNRNPENIFAEVEQSIFSPAHFVPGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHATEARTHSRDGFLYDGRHKGAKNYEPNSFGGPVQTDRPLWQPTPVTGVTGDHAAPSHAEDDDFTQAGDLY 428          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.037e-16
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP 212
            R  GR  LN+N  N++AE E +AF+P   VPG+  SND +LQ R+F+Y DT RHRLGPNY  +PVN P
Sbjct:  301 RHFGRFTLNENPKNYYAETEQIAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCP 368          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_BOTFU (Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.661e-16
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSD 341
            R  G++ LN+N+DNFFAE E  AF+P  +VPG   + D ++Q R  AY DTQR+RLG N++ LPVNAP K P      DG      +     +YFPS +     A +Y  P +
Sbjct:  299 RKFGKITLNRNVDNFFAEQEQSAFSPTNLVPGWALTPDPIIQTRALAYADTQRYRLGANFVQLPVNAPYKKPFTPLIRDGAATVNGNLGGTPNYFPSSFYNVGAATQYAQPDE 411          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 353
            P+G + LN N  N+FAE E   F PG VVPGI +++D +LQ R+F+Y DTQ  RH  GPN+  +PVN P+ P  NN+ DGF       +++      Y P   +  YP+ ++   G
Sbjct:  346 PLGMMELNANPTNYFAEVEQAGFQPGHVVPGIDFTDDPLLQGRLFSYLDTQLTRHG-GPNFEQIPVNRPRKPVHNNNRDGF-----GQQQIPTNNWAYTPNSMSNGYPMQANQTQG 455          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATT_YEAST (Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 224
            R  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ R+F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  303 RKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATT_YEAS7 (Catalase T OS=Saccharomyces cerevisiae (strain YJM789) GN=CTT1 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 224
            R  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ R+F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  303 RKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATB_AJECA1.194e-1649.37Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATB_STAXY1.560e-1636.11Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATA_STAS11.560e-1635.42Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]
CATA_LACSK1.560e-1641.59Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
BCA_STRVL1.560e-1637.96Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_PICAN2.037e-1655.88Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATA_BOTFU2.661e-1642.48Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 ... [more]
CATR_ASPNG4.538e-1640.52Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]
CATT_YEAST5.927e-1652.63Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=... [more]
CATT_YEAS75.927e-1652.63Catalase T OS=Saccharomyces cerevisiae (strain YJM... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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