CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.842e-15
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP 212
            R  G+  LN+N  N+FAE E  AF+P   VPG+  SND +LQ R+F+Y DT RHRLG NY  +PVN P
Sbjct:  298 RHFGKFTLNENAQNYFAEVEQAAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGVNYSQIPVNCP 365          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.118e-14
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 245
            +G++ LN+N  N+FAE E + F PG +V G+ ++ D +LQ R+F+Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  343 LGKMTLNRNPRNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINQPRVPVHNNNRDG 420          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.118e-14
Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPI----PSDVITGRREKACIEKENNFKQPG 404
            VG L LN+N +N FA+ E  AF+P   VPGI  S D+ML  R FAY D Q +R+G +   LPVN PK    N  ++G M + H  +   Y P+    +   E  P+     +D    R  +A    +++F Q G
Sbjct:  298 VGTLTLNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAG 431          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.118e-14
Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDG-FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGR 356
            +G + LN+N  N+FAE E ++F PG +V G+ ++ D +LQ R+++Y DTQ  RHR GPN+  LP+N P     NNH DG    ++H++         Y P+   + YP  ++   GR
Sbjct:  344 LGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTEDPLLQGRLYSYLDTQLNRHR-GPNFEQLPINRPVSGVHNNHRDGQGQAWIHKNIH------HYSPSYLNKGYPAQANQTVGR 453          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.907e-14
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 245
            +G++ LN+N  N+FAE E + F PG +V G+ ++ D +LQ R+F+Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  344 LGKMQLNRNPRNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINQPRVPVHNNNRDG 421          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 1.236e-13
Identity = 41/87 (47.13%), Postives = 50/87 (57.47%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKC-----PHRNNHYDGFMN 254
            R  G+  LN+N  N+FAE E  AF+P   VP +  S D +LQ R+F+Y DT RHRLG NY  +PVN P       PH     DG MN
Sbjct:  289 RRFGKFTLNENPKNYFAEVEQAAFSPAHTVPHMEPSADPVLQSRLFSYADTHRHRLGTNYTQIPVNCPVTGAVFNPHMR---DGAMN 372          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPS 293
            +G++ L  N  N+FAE E + F PG +V G+ +S+D +LQ RI++Y DTQ +R  GPN+  LPVN P+    NN+ DG         +  Y P+
Sbjct:  345 LGKMKLTDNPTNYFAETEQVMFQPGHIVRGVDFSDDPLLQGRIYSYLDTQLNRNGGPNFEQLPVNRPRTKVHNNNRDGAGQMFIHTNKAPYSPN 438          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_YEAST (Peroxisomal catalase A OS=Saccharomyces cerevisiae GN=CTA1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.108e-13
Identity = 52/156 (33.33%), Postives = 76/156 (48.72%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHY-----DGFMN----------FMHRDEEVDYFPSRYDPTRHAERY---PIPSDVITGRREKACIEKENNF----KQPGER 410
            R VG++VLN+N  NFFA+ E  AF P   VP    S D +LQ R+F+Y D  R+RLGPN+  +PVN   CP+ +  +     DG MN          ++  D+   Y        +H E +    IP    T   +   ++  N +    KQPG++
Sbjct:  308 RRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYADAHRYRLGPNFHQIPVN---CPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPIQQHQEVWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQ 460          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.753e-13
Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKML-QCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 245
            P+G++ LN+N  N+FAE E + F PG VV G+ ++ D +L Q R+F+Y DTQ +R  GPN+  LP+N P+    NN+ DG
Sbjct:  341 PLGKMTLNRNPRNYFAETEQVMFQPGHVVRGVDFTEDPLLQQGRLFSYLDTQLNRNGGPNFEQLPINQPRVAIHNNNRDG 420          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 1.785e-12
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQR-HRLGPNYLMLPVNAPKC-----PHR-------NNHYDGFMNFMHRDEEVDY 284
            R  G+  LN+N +N+FAE E  AF+P   VP +  S D +LQ R+F+Y DT R HRLG NY  +PVN P       PH        N +     N++  D+ V++
Sbjct:  289 RRFGKFTLNENPENYFAEVEQAAFSPAHTVPYMEPSADPVLQSRLFSYADTHRPHRLGTNYTQIPVNCPVTGAVFNPHSRDGAMTVNGNLGSHPNYLASDKPVEF 393          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA_CANBO3.842e-1554.41Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]
CATB_ASPOR1.118e-1446.15Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATA_MICLU1.118e-1436.57Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CAT3_NEUCR1.118e-1437.61Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATB_ASPFU1.907e-1446.15Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_CANTR1.236e-1347.13Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_ERYGR1.614e-1340.43Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATA_YEAST2.108e-1333.33Peroxisomal catalase A OS=Saccharomyces cerevisiae... [more]
CATB_EMENI2.753e-1346.25Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_CANAL1.785e-1239.05Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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