CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:296..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.335e-59
Identity = 103/135 (76.30%), Postives = 118/135 (87.41%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC + NNH+DG MNFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 5.662e-59
Identity = 100/135 (74.07%), Postives = 117/135 (86.67%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLN+ IDNFF E E LAFNPG+VVPGIYYS+DK+LQCRIFAYGDTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEE++Y+PS++DP R AE+ P P++  TG R K  I+KENNFKQ G+RY
Sbjct:  301 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 5.662e-59
Identity = 103/135 (76.30%), Postives = 115/135 (85.19%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFF ENE +AF P +VVPGI+YS+DK+LQ RIF+Y D+QRHRLGPNYL LPVNAPKC H NNH+DGFMNFMHRDEEV+YFPSR DP RHAE+YP    V +G REK  I KENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFNENEQIAFCPALVVPGIHYSDDKLLQTRIFSYADSQRHRLGPNYLQLPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.394e-59
Identity = 105/136 (77.21%), Postives = 120/136 (88.24%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERY 413
            RPVGRLVLNKNIDNFFAENEMLAF+  +V PGI+YS+DKMLQ R FAY DTQRHRLGPNYL LPVNAPKCPH NNH++GFMNFMHRDEEV+YFPSRYD  RHAE+YP+P +V++G+RE+  I KEN NFKQ G+RY
Sbjct:  301 RPVGRLVLNKNIDNFFAENEMLAFSMSLV-PGIHYSDDKMLQARSFAYADTQRHRLGPNYLQLPVNAPKCPHHNNHHEGFMNFMHRDEEVNYFPSRYDACRHAEKYPMPPNVLSGKRERCVIPKENHNFKQAGDRY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.810e-58
Identity = 101/137 (73.72%), Postives = 119/137 (86.86%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPVNAPKC  +NNHYDG MNFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERY
Sbjct:  301 QPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERY 437          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.810e-58
Identity = 103/134 (76.87%), Postives = 111/134 (82.84%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIPS V+ GRR    I KENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 6.260e-58
Identity = 102/134 (76.12%), Postives = 111/134 (82.84%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIP+ V+ GRR    I KENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 8.175e-58
Identity = 102/136 (75.00%), Postives = 115/136 (84.56%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH-AERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            RPVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPVNAP+C H NNHYDG MNFMHRDEEVDY+PSR+ P R  A   P+P   + GRREKA I K N+FKQPGERY
Sbjct:  304 RPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERY 439          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.068e-57
Identity = 102/134 (76.12%), Postives = 111/134 (82.84%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDYFPSR+DP R AE+YPIP+ V+ GRR    I KENN KQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.394e-57
Identity = 100/137 (72.99%), Postives = 118/137 (86.13%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPVNAPKC  + NHYDG MNFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERY
Sbjct:  300 QPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKKNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERY 436          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA2_ORYSJ4.335e-5976.30Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA3_ARATH5.662e-5974.07Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA1_ARATH5.662e-5976.30Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA2_CUCPE7.394e-5977.21Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA2_HORVU2.810e-5873.72Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA1_SOLLC2.810e-5876.87Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_SOLTU6.260e-5876.12Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA3_MAIZE8.175e-5875.00Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATA1_SOLTU1.068e-5776.12Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA_SECCE1.394e-5772.99Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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