CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 2.908e-55
Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I++PGIYYS+DKMLQ R+F+Y D+QRHRLGPNYL LPVNAPK  H NNH++GFMN +HRDEEV+YFPSR+D  RHAER PIP+  ++ RREK  I K+N+FKQ GERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIMLPGIYYSDDKMLQTRVFSYADSQRHRLGPNYLQLPVNAPKWSHHNNHHEGFMNAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 64/138 (46.38%), Postives = 85/138 (61.59%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGR-REKACIEKENNF---KQPGERY 413
            VG + LN+N DN FAE E + FNPG++VPG+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    Y  P   I G    +   EK NNF   K+  +RY
Sbjct:  293 VGTMTLNRNPDNIFAETESVGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRY 430          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD------PTRHAERYPIPSDVITGRREKACIEKENNF---KQPGERY 413
            VG + LN+N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG+M F  +   ++Y P+ Y+      P    +   I  D I+GR      EK NNF   K+  +RY
Sbjct:  293 VGTMTLNRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGD-ISGR---LIAEKPNNFGHAKEVWDRY 430          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.663e-26
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACI-EKENNF---KQPGERY 413
            VG + L++N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    +  P   I G      I EK NNF   K+  +RY
Sbjct:  293 VGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRY 430          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.704e-26
Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            R +G++VLN+N+DNFF E E +A  P  +VPGI  S D++LQ R+FAY DTQ +R+G N L LPVN P+      + DG +N  H    V+Y PSR DP             ++G  ++A I++E NFKQ GE +
Sbjct:  314 RKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELF 448          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.078e-25
Identity = 58/135 (42.96%), Postives = 83/135 (61.48%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            + +G++VLNKN+DNFF E E +A  P  +VPGI  S D++LQ R+F+Y DTQ +RLG   L LPVN PK    N + DG +N  H    V+Y PSR +P    ++       ++G  ++A I +E NFKQ G+ +
Sbjct:  311 KKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLF 445          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.838e-25
Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM-----NFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            R VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ R F+Y DTQR+R+GPNYL LP+NAPK     N  DG M      F  +D+ V+Y PS    P     R P  +  + G   +A IE+ N F Q G +Y
Sbjct:  322 RHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQY 462          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.457e-22
Identity = 56/133 (42.11%), Postives = 82/133 (61.65%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHY----DGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 401
            VG++VLN+N+ N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R+  +    DG M +  + +  +YFP+ +   R  +     +   TG  ++     ++N++QP
Sbjct:  309 VGKMVLNRNVKNYFAEVEQAAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHYHRLGPNYIQLPVN---CPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYRTRDDVKESTFQTTGDVDRYETGDDHNYEQP 438          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.484e-22
Identity = 52/106 (49.06%), Postives = 72/106 (67.92%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 329
            VG++VLN+N DNFFAENE  AF+PG +VPG+ ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP+ N   DG    MHR   +D  P+ Y+P    + +P
Sbjct:  370 VGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR-MGIDTNPANYEPNSINDNWP 470          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.229e-22
Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFM-----HRDEEVDYFPSRYDPTRHAER-YPIPSDVITGRREKACIEKENNFKQPGERY 413
            +P+G+LVLNKN +N+ AE E  +F  G++V G+ +S+DK+LQ R FAY DTQR+R+G NYL LP+N+PK     N   G M +       ++  V+Y PS     + A++     +  + G  ++  I++ NNF Q GE Y
Sbjct:  324 KPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETY 464          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA_PEA2.908e-5571.85Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA_LISSE8.816e-2846.38Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_LISIN4.375e-2745.07Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISMO1.663e-2644.93Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATB_PSEAE3.704e-2643.70Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATB_PSESY1.078e-2542.96Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_DEIRA1.838e-2544.68Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA2_CAEEL1.457e-2242.11Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATE_ECOLI2.484e-2249.06Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATX_BACSU7.229e-2239.72Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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