CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 8.836e-20
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 254
            +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  292 IGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 8.836e-20
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 254
            +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  292 IGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 302
            P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P  P+ NN  D     +       Y P+  D
Sbjct:  333 PLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRDALHQHVVHKGRASYEPNSID 430          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 3
Query:   15 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQP 401
            +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP
Sbjct:  289 IGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQP 419          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRH 314
            PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  312 PVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.571e-19
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYD 242
            R VGR+VLN+N DNFFAE E +AF+ G VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN  D
Sbjct:  330 RVVGRMVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNEIPINRPLCPFHNNQRD 408          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.571e-19
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHA-----ERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            R VG L LN+NID FF E E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+N P CP  N++ DG          V+Y+P+R++    A     + +P P   ITGR+ +    K   +    + +
Sbjct:  333 RVVGELELNRNIDEFFPETEQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            + VG + LNK  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LP+N P     +++ +G  N      +++Y PSR    +   ++      + G  ++  I    NF Q G  Y
Sbjct:  306 KKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKAISNPRNFYQAGVLY 440          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 299
            PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  312 PVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 299
            PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  312 PVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA_BRUME8.836e-2055.00Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB8.836e-2055.00Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATE_PSEPU1.154e-1946.94Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_CAMJE1.154e-1939.69Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_CALJA1.154e-1949.06Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATE_PSEAE2.571e-1958.23Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_EMENI2.571e-1937.86Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_VIBCH3.358e-1936.30Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_PONAB3.358e-1951.49Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_HUMAN3.358e-1951.49Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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