CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KPSH1_DANRE (Serine/threonine-protein kinase H1 homolog OS=Danio rerio GN=pskh1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.367e-13
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIE----RGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F     + H+ T++  A+K IE     GR++ E+   E+   R +RH NII+  EV  T   + +VME A GGELFDRI   G F+E +     Q ++ GV Y H++ I
Sbjct:  105 GSFSRVVRVEHRSTRQPYAIKMIETRYREGREVCES---ELCVLRRVRHTNIIQLMEVFETAERVYMVMELATGGELFDRIITRGSFTERDATRVLQMVLDGVKYLHTLGI 212          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: FHKC_DICDI (Probable serine/threonine-protein kinase fhkC OS=Dictyostelium discoideum GN=fhkC PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.367e-13
Identity = 42/109 (38.53%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR-----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            GNF   RL   KET    A+K I++ +     K  +++  E+     ++H NII  KEV  T  +L +V+E   GGELFD+I +  +F ED  RY  +QL   V Y HS
Sbjct:  227 GNFASVRLGVEKETGNKYAIKIIDKKKMSMTSKRKDSLMDEVNVLTKVKHQNIISIKEVFETQKNLYLVLELVTGGELFDKIVSERKFQEDTCRYILKQLCDSVRYLHS 335          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.367e-13
Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 1
Query:   85 RIWEPGNFGVARLLRHKETKELVAVKYIERGRKID----ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            R+   G F      R+ +T + VA+K + + + +     + + REI   R ++HPNI+   EV+ + + +   ME   GGELF ++   GR  ED  R +FQQLIS V++CHS
Sbjct:   28 RLLGHGTFAKVYHARNIQTGKSVAMKVVGKEKVVKVGMVDQIKREISVMRMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAK-GRLREDVARVYFQQLISAVDFCHS 139          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KPSH1_MOUSE (Serine/threonine-protein kinase H1 OS=Mus musculus GN=Pskh1 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIE----RGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F     + H+ T++  A+K IE     GR++ E+  R +   R +RH NII+  EV  T   + +VME A GGELFDRI   G F+E +     Q ++ GV Y H++ I
Sbjct:  107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVCESELRVL---RRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGI 214          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KPSH1_HUMAN (Serine/threonine-protein kinase H1 OS=Homo sapiens GN=PSKH1 PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIE----RGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F     + H+ T++  A+K IE     GR++ E+  R +   R +RH NII+  EV  T   + +VME A GGELFDRI   G F+E +     Q ++ GV Y H++ I
Sbjct:  107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVCESELRVL---RRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGI 214          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KPSH1_BOVIN (Serine/threonine-protein kinase H1 OS=Bos taurus GN=PSKH1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIE----RGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F     + H+ T++  A+K IE     GR++ E+  R +   R +RH NII+  EV  T   + +VME A GGELFDRI   G F+E +     Q ++ GV Y H++ I
Sbjct:  107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVCESELRVL---RRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGI 214          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: DCLK3_MOUSE (Serine/threonine-protein kinase DCLK3 OS=Mus musculus GN=Dclk3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF   +  RH+ETK+  A+K I++   +  ++ V  EI+  +SL HPNI++  EV  T   + ++MEY  GG+LFD I    +F E E       L   + + H   I
Sbjct:  352 GNFATVKECRHRETKQAYAMKMIDKSQLKGKEDIVDSEILIIQSLSHPNIVKLHEVYETEAEIYLIMEYVQGGDLFDAIVENVKFPEPEAAVMITDLCKALVHMHDKNI 460          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MRKC_DICDI (Probable serine/threonine-protein kinase MARK-C OS=Dictyostelium discoideum GN=mrkC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.864e-12
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR---KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLA---IVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G FG  +L  +  TKE VA+K+I+  +   K  E   REI   + L HPNI++  +VV          +++EY +GGELFD I       E E R FF+Q+IS + YCH+
Sbjct:   55 GTFGKVKLGTNICTKENVAIKFIKNNKLSGKQKETCFREIDIMKLLDHPNIVKLLDVVDKREEEGTTYLIVEYVSGGELFDYIVAREYIKEKEARKFFRQMISAIEYCHA 164          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.864e-12
Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   +L  H  T E+VA+K +++     +   V  EI   +SLRH +I +   V+ T   + +V+EY  GGELFD I +  R SE+E R  F+Q++S V Y HS
Sbjct:   20 GGFAKVKLACHVLTGEMVAIKIMDKNALGSDLPRVKTEIDALKSLRHQHICQLYHVLETKNKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQILSAVAYVHS 125          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC1_YEAST (Calcium/calmodulin-dependent protein kinase I OS=Saccharomyces cerevisiae GN=CMK1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.864e-12
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIER----GRKID-ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G FGV R  ++ ET E VAVK + +    G K+  E +  E+   + L HPNI+ FK+   +     I+ + A GGELFDRI   G+F+E++      +++S V Y HS  I
Sbjct:   46 GTFGVVRQAKNTETGEDVAVKILIKKALKGNKVQLEALYDELDILQRLHHPNIVAFKDWFESKDKFYIITQLAKGGELFDRILKKGKFTEEDAVRILVEILSAVKYMHSQNI 157          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KPSH1_DANRE8.367e-1337.84Serine/threonine-protein kinase H1 homolog OS=Dani... [more]
FHKC_DICDI8.367e-1338.53Probable serine/threonine-protein kinase fhkC OS=D... [more]
CIPK6_ARATH8.367e-1335.40CBL-interacting serine/threonine-protein kinase 6 ... [more]
KPSH1_MOUSE1.427e-1237.84Serine/threonine-protein kinase H1 OS=Mus musculus... [more]
KPSH1_HUMAN1.427e-1237.84Serine/threonine-protein kinase H1 OS=Homo sapiens... [more]
KPSH1_BOVIN1.427e-1237.84Serine/threonine-protein kinase H1 OS=Bos taurus G... [more]
DCLK3_MOUSE1.427e-1234.86Serine/threonine-protein kinase DCLK3 OS=Mus muscu... [more]
MRKC_DICDI1.864e-1239.09Probable serine/threonine-protein kinase MARK-C OS... [more]
MELK_MOUSE1.864e-1238.68Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
KCC1_YEAST1.864e-1237.50Calcium/calmodulin-dependent protein kinase I OS=S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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