CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.864e-12
Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID----ENVAREI-INHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G FGV  L+ HKETK+ VA K I   R +     E+V RE+ I H    H NI+  K        + ++ME   GGELFDRI + G +SE       +Q++  V+ CHSM +
Sbjct:   87 GQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGV 198          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MYLKB_DICDI (Probable myosin light chain kinase DDB_G0271550 OS=Dictyostelium discoideum GN=DDB_G0271550 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.434e-12
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENV---AREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQIC 423
            G F + R   HK+T + VA+K I +    + ++    REI   + L+H NII+  EV  +  +L +V+E   GGELFD+I   G +SE +     +Q++S V Y H   +C
Sbjct:   29 GAFSIVRQGTHKDTGDQVAIKAISKQHVSEADMKRFTREIEIMKKLKHKNIIQLIEVFDSNDYLYLVLELIRGGELFDKIVEKGNYSEKDACNLVRQIVSAVEYMHQHGVC 139          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KIN1_ENCCU (Probable serine/threonine-protein kinase KIN1 homolog OS=Encephalitozoon cuniculi GN=KIN1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.434e-12
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  127 RHKETKELVAVKYIERG----------RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            R   + E VA+K I R            + D+ V RE+I    L HP+I R K  + +PTH  ++ EY  G +L+D I ++G   E EG+ +F+QL+S ++Y H
Sbjct:   76 RDVRSGEKVAIKIIPRRVNGGETGDMEMRCDQRVFREVIISSVLNHPHIARLKNFLYSPTHYFLIFEYVKGRQLYDIIISSGPLKEKEGQRYFRQLLSAIDYIH 179          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: GIN4_YEAST (Serine/threonine-protein kinase GIN4 OS=Saccharomyces cerevisiae GN=GIN4 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.434e-12
Identity = 45/125 (36.00%), Postives = 64/125 (51.20%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVA------------------REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+ G  +L R+  T +  AVK I +      NV+                  REII  + L HPN++R  +V  T T L +V+EYA  GELF+ +   G   E E   FF+Q+I GV+YCH++ I
Sbjct:   28 GSTGKVQLARNGSTGQEAAVKVISKAVFNTGNVSGTSIVGSTTPDALPYGIEREIIIMKLLNHPNVLRLYDVWETNTDLYLVLEYAEKGELFNLLVERGPLPEHEAIRFFRQIIIGVSYCHALGI 152          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC1B_RAT (Calcium/calmodulin-dependent protein kinase type 1B OS=Rattus norvegicus GN=Pnck PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G F    L + + +  LVA+K I +   R  +  V  EI   R + HPNI+  ++V  +P+HL + ME   GGELFDRI   G ++E +  +   Q++  V+Y HS+ I
Sbjct:   24 GAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGI 132          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC1B_MOUSE (Calcium/calmodulin-dependent protein kinase type 1B OS=Mus musculus GN=Pnck PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G F    L + + +  LVA+K I +   R  +  V  EI   R + HPNI+  ++V  +P+HL + ME   GGELFDRI   G ++E +  +   Q++  V+Y HS+ I
Sbjct:   24 GAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGI 132          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: HSL1_YEAST (Probable serine/threonine-protein kinase HSL1 OS=Saccharomyces cerevisiae GN=HSL1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 31/109 (28.44%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   97 PGNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQIC 423
            P ++  + +  +  +  + + ++    +     + REI+  + + H N++   EV    + L +V+EY  GGELFD + + G+  E E  ++F+Q++ GV+YCHS  IC
Sbjct:  128 PNSYSSSMVTSNVSSPSIASREHSNHSQTNPYGIEREIVIMKLISHTNVMALFEVWENKSELYLVLEYVDGGELFDYLVSKGKLPEREAIHYFKQIVEGVSYCHSFNIC 236          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SMK2B_MOUSE (Sperm motility kinase 2B OS=Mus musculus GN=Smok2b PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.152e-12
Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G      L RH+ T   VAVK I +       V  E+       HPNII   +V+ T   + ++ME   G  L+  I NAG   EDE R  F+QL+S +NYCH+  I
Sbjct:   17 GGCSKVMLARHRLTGSHVAVKMIRKSECWCNPVMSEVELLMMADHPNIISLLQVIETKKKVYLIMELCEGKSLYQHIRNAGYLQEDEARALFKQLLSAMNYCHNQGI 123          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 4.152e-12
Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID---ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQ-----------------------LISGVNYCHSMQI 420
            GNF   +L RH  T   VA+K I++ +      + + RE+   + L HPNI++  EV+ T   L ++MEYA+GGE+FD +   GR  E E R  F+Q                       ++S V YCH  +I
Sbjct:   65 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQGCQAGQTIKVQVSFDLLSLMFTFIVSAVQYCHQKRI 197          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KS6A5_PONAB (Ribosomal protein S6 kinase alpha-5 OS=Pongo abelii GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.152e-12
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLR-HPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F + R   HK++ +  AVK I +  +++ N  +EI   +    HPNI++  EV     H  +VME   GGELF+RI     FSE E  Y  ++L+S V++ H + +
Sbjct:  435 GSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV 540          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CDPK3_ARATH1.864e-1239.29Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
MYLKB_DICDI2.434e-1235.14Probable myosin light chain kinase DDB_G0271550 OS... [more]
KIN1_ENCCU2.434e-1235.58Probable serine/threonine-protein kinase KIN1 homo... [more]
GIN4_YEAST2.434e-1236.00Serine/threonine-protein kinase GIN4 OS=Saccharomy... [more]
KCC1B_RAT3.179e-1235.78Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_MOUSE3.179e-1235.78Calcium/calmodulin-dependent protein kinase type 1... [more]
HSL1_YEAST3.179e-1228.44Probable serine/threonine-protein kinase HSL1 OS=S... [more]
SMK2B_MOUSE4.152e-1237.38Sperm motility kinase 2B OS=Mus musculus GN=Smok2b... [more]
MARK3_HUMAN4.152e-1233.08MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
KS6A5_PONAB4.152e-1235.19Ribosomal protein S6 kinase alpha-5 OS=Pongo abeli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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