CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC4_MOUSE (Calcium/calmodulin-dependent protein kinase type IV OS=Mus musculus GN=Camk4 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.208e-11
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  127 RHKETKELVAVKYIERGRKIDENVAR-EIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            + K T++  A+K +++   +D+ + R EI     L HPNII+ KE+  TPT +++V+E   GGELFDRI   G +SE + R   +Q++  V Y H
Sbjct:   60 KQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDARDAVKQILEAVAYLH 152          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC1D_MOUSE (Calcium/calmodulin-dependent protein kinase type 1D OS=Mus musculus GN=Camk1d PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.208e-11
Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G F    L   K T +L AVK I +   +  + ++  EI   R ++H NI+  +++  +P HL +VM+  +GGELFDRI   G ++E +     +Q++  V Y H M I
Sbjct:   32 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 140          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC1D_HUMAN (Calcium/calmodulin-dependent protein kinase type 1D OS=Homo sapiens GN=CAMK1D PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.208e-11
Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G F    L   K T +L AVK I +   +  + ++  EI   R ++H NI+  +++  +P HL +VM+  +GGELFDRI   G ++E +     +Q++  V Y H M I
Sbjct:   32 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 140          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SMK_RAT (Sperm motility kinase OS=Rattus norvegicus GN=Smok PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G FG  +L  H  T+  VA+K + +  K +  +  EI   +SL HP+II+   ++ T  ++ IV+E+A GGEL  RI + G   E+E    F+Q++  + YCH   I
Sbjct:   33 GGFGEVKLASHLLTQTKVAIKVLPKSNK-NLLLKSEIEIMKSLDHPHIIKLLHIIDTNENIFIVLEHAVGGELLTRIEDFGYLPEEECNRLFRQMVLALQYCHQRGI 138          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KS6A5_CHICK (Ribosomal protein S6 kinase alpha-5 OS=Gallus gallus GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLR-HPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+F + R   HK+T +  AVK I +  +++ N  REI   +    HPN+++  EV     H  +VME   GGEL +RI     FSE E  +  ++L+S V++ H + +
Sbjct:  425 GSFSICRKCLHKKTSQEYAVKIISK--RMEANTQREITALKLCEGHPNVVKLHEVYHDQLHTFLVMELLKGGELLERIQKKQHFSETEASHIMRRLVSAVSHMHDVGV 530          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC2_YEAST (Calcium/calmodulin-dependent protein kinase II OS=Saccharomyces cerevisiae GN=CMK2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINH-----RSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FGV R  R   T E VA+K + +      NV  +++       + L HPNI+ FK+   +     IV + A GGELFDRI + G+F+E +      Q++  V Y HS  +
Sbjct:   56 GSFGVVRQARKLSTNEDVAIKILLKKALQGNNVQLQMLYEELSILQKLSHPNIVSFKDWFESKDKFYIVTQLATGGELFDRILSRGKFTEVDAVEIIVQILGAVEYMHSKNV 167          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIER------GRKIDENVAREIINHRSL-RHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDR-ICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F      R   + E VAVK I++      G  + + + RE+   R + RHPN++R  EV+ + + +  VME   GGEL  R +   GR  ED  R +F QL++ V++CHS
Sbjct:   21 GTFSKVYQARSLVSGETVAVKVIDKEKALRAGAGMVDQIEREVAVMRLVGRHPNVVRLHEVMASRSKIYFVMELVRGGELLARLVAGGGRLGEDAARRYFHQLVAAVDFCHS 132          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CHK1_MOUSE (Serine/threonine-protein kinase Chk1 OS=Mus musculus GN=Chek1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID--ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G +G  +L  ++ T+E VAVK ++  R ID  EN+ +EI  ++ L H N+++F           + +EY +GGELFDRI       E + + FF QL++GV Y H + I
Sbjct:   18 GAYGEVQLAVNRITEEAVAVKIVDMKRAIDCPENIKKEICINKMLSHENVVKFYGHRREGHIQYLFLEYCSGGELFDRIEPDIGMPEQDAQRFFHQLMAGVVYLHGIGI 126          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SMOK1_MOUSE (Sperm motility kinase 1 OS=Mus musculus GN=Smok1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.692e-11
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G     +L RH+ T   VAVK I +     + +  E        HPNII   +V+ T   + ++ME   G  L+  I NAG   EDE R  F+QL+S +NYCH+  I
Sbjct:   17 GGCAKVKLARHRLTGTHVAVKMIPKREYWCKLLMFEAELLMMFNHPNIISLLQVIETKKKVYLIMELCEGKSLYQHIQNAGYLQEDEARPLFKQLLSAMNYCHNQGI 123          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SMKTR_MOUSE (Sperm motility kinase Tcr mutant form OS=Mus musculus GN=Smoktcr PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.692e-11
Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G     +L RH+ T   VAVK I +       V  E        HPNII   +V+ T   + ++ME   G  L+  I NAG   EDE R  F+QL+S +NYCH+  I
Sbjct:   17 GGCAQVKLARHRLTGTHVAVKVIVKRECWFNPVMSEAELLMMTDHPNIISLLQVIETKKKVYLIMELCEGKSLYQHIQNAGYLQEDEARPLFKQLLSAMNYCHNQGI 123          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KCC4_MOUSE1.208e-1138.95Calcium/calmodulin-dependent protein kinase type I... [more]
KCC1D_MOUSE1.208e-1133.94Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1D_HUMAN1.208e-1133.94Calcium/calmodulin-dependent protein kinase type 1... [more]
SMK_RAT1.578e-1135.51Sperm motility kinase OS=Rattus norvegicus GN=Smok... [more]
KS6A5_CHICK1.578e-1134.26Ribosomal protein S6 kinase alpha-5 OS=Gallus gall... [more]
KCC2_YEAST1.578e-1134.82Calcium/calmodulin-dependent protein kinase II OS=... [more]
CIPKK_ORYSJ1.578e-1135.71CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CHK1_MOUSE1.578e-1136.70Serine/threonine-protein kinase Chk1 OS=Mus muscul... [more]
SMOK1_MOUSE2.692e-1136.45Sperm motility kinase 1 OS=Mus musculus GN=Smok1 P... [more]
SMKTR_MOUSE2.692e-1137.38Sperm motility kinase Tcr mutant form OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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