CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10744 contig Csv1_Contig10744:167..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: STK6L_XENLA (Serine/threonine-protein kinase Eg2-like OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.591e-11
Identity = 33/111 (29.73%), Postives = 59/111 (53.15%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRK----IDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G FG   L R +E+K ++A+K + + +     ++  + RE+     LRHPNI+R        + + ++++YA GGELF  +    RF +     + +QL   + YCHS ++
Sbjct:  149 GKFGNVYLARERESKFILALKVLFKSQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDASRVYLILDYAPGGELFRELQKCTRFDDQRSALYIKQLAEALLYCHSKKV 259          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: NEK3_HUMAN (Serine/threonine-protein kinase Nek3 OS=Homo sapiens GN=NEK3 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.996e-11
Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID--ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRI--CNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG A L++H+ + ++ A+K I   +     +N  +E +    ++HPNI+ FKE      HL IVMEY  GG+L  +I       F ED    +F Q+  GVN+ H  ++
Sbjct:   13 GSFGRALLVQHESSNQMFAMKEIRLPKSFSNTQNSRKEAVLLAKMKHPNIVAFKESFEAEGHLYIVMEYCDGGDLMQKIKQQKGKLFPEDMILNWFTQMCLGVNHIHKKRV 123          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC4_RAT (Calcium/calmodulin-dependent protein kinase type IV OS=Rattus norvegicus GN=Camk4 PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 5.996e-11
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 1
Query:  127 RHKETKELVAVKYIERGRKIDENVAR-EIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            + K T++  A+K +++   +D+ + R EI     L HPNII+ KE+  TPT +++V+E   GGELFDRI   G +SE +     +Q++  V Y H
Sbjct:   60 KQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 152          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KCC4_HUMAN (Calcium/calmodulin-dependent protein kinase type IV OS=Homo sapiens GN=CAMK4 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.996e-11
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 1
Query:  127 RHKETKELVAVKYIERGRKIDENVAR-EIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            + K T++  A+K +++   +D+ + R EI     L HPNII+ KE+  TPT +++V+E   GGELFDRI   G +SE +     +Q++  V Y H
Sbjct:   64 KQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 156          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKT_ORYSJ (CBL-interacting protein kinase 29 OS=Oryza sativa subsp. japonica GN=CIPK29 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.996e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 1
Query:  196 VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            + RE      LRH +++R +E++ T   +  V++ AAGGELF  +  +GR +ED  R++F+QLIS V YCHS
Sbjct:   86 IEREAAILPRLRHRHVMRLREILATRKKVHFVLDLAAGGELFSLLDASGRMTEDLARHYFRQLISAVRYCHS 157          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KAPCG_HUMAN (cAMP-dependent protein kinase catalytic subunit gamma OS=Homo sapiens GN=PRKACG PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.831e-11
Identity = 33/111 (29.73%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHR----SLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG   L+RH+ET    A+K + + + +       I+N +    ++  P +++ +      ++L +VMEY  GGE+F R+   GRFSE    ++  Q++  V Y HS+ +
Sbjct:   53 GSFGRVMLVRHQETGGHYAMKILNKQKVVKMKQVEHILNEKRILQAIDFPFLVKLQFSFKDNSYLYLVMEYVPGGEMFSRLQRVGRFSEPHACFYAAQVVLAVQYLHSLDL 163          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KAPCB_HUMAN (cAMP-dependent protein kinase catalytic subunit beta OS=Homo sapiens GN=PRKACB PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.831e-11
Identity = 31/111 (27.93%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHR----SLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG   L++HK T++  A+K +++ + +        +N +    ++  P ++R +      ++L +VMEY  GGE+F  +   GRFSE   R++  Q++    Y HS+ +
Sbjct:   53 GSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVRLEYAFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KAPCB_BOVIN (cAMP-dependent protein kinase catalytic subunit beta OS=Bos taurus GN=PRKACB PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.831e-11
Identity = 31/111 (27.93%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHR----SLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG   L++HK T++  A+K +++ + +        +N +    ++  P ++R +      ++L +VMEY  GGE+F  +   GRFSE   R++  Q++    Y HS+ +
Sbjct:   53 GSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVRLEYAFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
STK6L_XENLA4.591e-1129.73Serine/threonine-protein kinase Eg2-like OS=Xenopu... [more]
NEK3_HUMAN5.996e-1134.23Serine/threonine-protein kinase Nek3 OS=Homo sapie... [more]
KCC4_RAT5.996e-1137.89Calcium/calmodulin-dependent protein kinase type I... [more]
KCC4_HUMAN5.996e-1137.89Calcium/calmodulin-dependent protein kinase type I... [more]
CIPKT_ORYSJ5.996e-1143.06CBL-interacting protein kinase 29 OS=Oryza sativa ... [more]
KAPCG_HUMAN7.831e-1129.73cAMP-dependent protein kinase catalytic subunit ga... [more]
KAPCB_HUMAN7.831e-1127.93cAMP-dependent protein kinase catalytic subunit be... [more]
KAPCB_BOVIN7.831e-1127.93cAMP-dependent protein kinase catalytic subunit be... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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