CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++ +H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TP+ + +VMEY +GGELFD IC  GR  E E R  FQQ++SGV+YCH
Sbjct:   36 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 142          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++ +H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TP+ + +VMEY +GGELFD IC  GR  E E R  FQQ++SGV+YCH
Sbjct:   31 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 137          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++ +H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TP+ + +VMEY +GGELFD IC  GR  E E R  FQQ++SGV+YCH
Sbjct:   36 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 142          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++ +H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TP+ + +VMEY +GGELFD IC  GR  E E R  FQQ++SGV+YCH
Sbjct:   36 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 142          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK1_ORYSJ (CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica GN=CIPK1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.172e-20
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNFG  +  RH  T    A+K ++R +    + D+ + REI   + L+HPN++R  EV  + T + +V+EY  GGELFD+I   G+ SE EGR  FQQLI  V+YCH
Sbjct:   28 GNFGKVKYARHLATGAHFAIKILDRNKILSLRFDDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEYVNGGELFDKIAVKGKLSEHEGRRLFQQLIDAVSYCH 134          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SNF1_SCHPO (SNF1-like protein kinase ssp2 OS=Schizosaccharomyces pombe GN=ssp2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.143e-20
Identity = 53/111 (47.75%), Postives = 74/111 (66.67%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDEN--VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG  +L  H +T++ VA+K+I R   +K D +  V REI   + LRHP+II+  +V+ TPT + +V+EYA GGELFD I    R +EDEGR FFQQ+I  + YCH  +I
Sbjct:   43 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 152          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   +  R+ ++ E VA+K +++ +    K+   + REI   + +RHPN+IR  EV+ + T + IVME   GGELFD+I + GR  ED+ R +FQQLI+ V+YCHS
Sbjct:   22 GTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIASRGRLKEDDARKYFQQLINAVDYCHS 129          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.574e-19
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G+FG  ++  H  T   VA+K + R +    +++E V REI   R   HP+IIR  EV+ T + + +VMEY   GELFD I   GR  EDE R FFQQ+ISGV YCH
Sbjct:   29 GSFGKVKIAEHVVTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRQYEVIETTSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCH 135          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.574e-19
Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G+F   ++ R   T + +A+K ++R      K+ E + REI   + ++HPN+++  EV+ + + + +V+EY  GGELFD+I N+GR  EDE R +F QLI+ V+YCHS
Sbjct:   36 GSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEARRYFHQLINAVDYCHS 143          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.574e-19
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG----RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   +  ++ ET E VA+K ++R     RK+ + + REI   + +RHP ++R  EV+ + T + I++EY  GGELFD+I   GR SE E R +F QLI GV+YCHS
Sbjct:   18 GTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHS 125          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
AAPK1_RAT2.429e-2046.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB2.429e-2046.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_MOUSE2.429e-2046.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN2.429e-2046.735'-AMP-activated protein kinase catalytic subunit ... [more]
CIPK1_ORYSJ3.172e-2043.93CBL-interacting protein kinase 1 OS=Oryza sativa s... [more]
SNF1_SCHPO4.143e-2047.75SNF1-like protein kinase ssp2 OS=Schizosaccharomyc... [more]
CIPKN_ORYSJ9.229e-2042.59CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
KIN11_ARATH1.574e-1946.73SNF1-related protein kinase catalytic subunit alph... [more]
CIPK9_ORYSJ1.574e-1939.81CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPK8_ARATH1.574e-1943.52CBL-interacting serine/threonine-protein kinase 8 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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