CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++  H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TPT   +VMEY +GGELFD IC  GR  E E R  FQQ++S V+YCH
Sbjct:   25 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCH 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++  H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TPT   +VMEY +GGELFD IC  GR  E E R  FQQ++S V+YCH
Sbjct:   25 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++  H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TPT   +VMEY +GGELFD IC  GR  E E R  FQQ++S V+YCH
Sbjct:   25 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++  H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TPT   +VMEY +GGELFD IC  GR  E E R  FQQ++S V+YCH
Sbjct:   25 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCH 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERG--RKIDE--NVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            G FG  ++  H+ T   VAVK + R   R +D    + REI N +  RHP+II+  +V+ TPT   +VMEY +GGELFD IC  GR  E E R  FQQ++S V+YCH
Sbjct:   25 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.580e-19
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   R  ++ ET + VA+K +++ +    ++ E + REI   + ++HPN++   EV+ + T + IV+EY  GGEL D I  +GR  EDE R +FQQLI+ V+YCHS
Sbjct:   28 GTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHS 135          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.982e-19
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   R   + ET E VA+K +++ +    K+ E + REI   + + HPN++R  EV+ + T + IV+E+  GGELFD+I + GR  E+  R +FQQLI+ V+YCHS
Sbjct:   22 GTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICTMKLINHPNVVRLYEVLASKTKIYIVLEFGTGGELFDKIVHDGRLKEENARKYFQQLINAVDYCHS 129          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPK1_ARATH (CBL-interacting serine/threonine-protein kinase 1 OS=Arabidopsis thaliana GN=CIPK1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.982e-19
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDEN----VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            GNFG  +  +   +    AVK I++ R  D N    + REI   + L+HP+I+R  EV+ + T + +VME   GGELFDRI + G+ +E +GR  FQQLI G++YCHS
Sbjct:   29 GNFGKVKFAKDTVSGHSFAVKIIDKSRIADLNFSLQIKREIRTLKMLKHPHIVRLHEVLASKTKINMVMELVTGGELFDRIVSNGKLTETDGRKMFQQLIDGISYCHS 136          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.813e-19
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            G F   +  R+ E  + VA+K I++ +    K+   + REI   + ++HPN+IR  EV+ + T +  V+E+  GGELFD+I + GR  EDE R +FQQLI+ V+YCHS
Sbjct:   40 GTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLKEDEARKYFQQLINAVDYCHS 147          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SMKW_MOUSE (Sperm motility kinase W OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.741e-18
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            G+FG  +L  H +TK LVA+K +E  +K    +  EI     L+HPNII   +V++T  H+ IV EY  GG LFD I   G   E+E R  F Q++S V YCH+  I
Sbjct:   23 GSFGTVKLACHLKTKALVAIKMVELSKKNIRGIRAEIATLEKLQHPNIICLFQVLVTSKHINIVTEYIPGGNLFDIIKEDGPMHEEEARRIFGQVVSAVKYCHNQDI 129          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
AAPK2_RAT2.056e-1946.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PONAB2.056e-1946.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG2.056e-1946.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_MOUSE2.056e-1946.735'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_HUMAN2.056e-1946.735'-AMP-activated protein kinase catalytic subunit ... [more]
CIPK3_ORYSJ4.580e-1940.74CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CIPKQ_ARATH5.982e-1941.67CBL-interacting serine/threonine-protein kinase 26... [more]
CIPK1_ARATH5.982e-1943.52CBL-interacting serine/threonine-protein kinase 1 ... [more]
CIPKN_ARATH7.813e-1941.67CBL-interacting serine/threonine-protein kinase 23... [more]
SMKW_MOUSE1.741e-1842.99Sperm motility kinase W OS=Mus musculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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