CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.924e-17
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDEN---VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L RH+ TK  VA+K I++ R    N   + RE+   + L HPNII+  +V+ T   L IV E+A  GE+FD + + G  SE+E R  F Q++S V YCH+  I
Sbjct:   36 GNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLEKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHNHHI 145          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK2_PONAB (Serine/threonine-protein kinase SIK2 OS=Pongo abelii GN=SIK2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.513e-17
Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID----ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L RH+ TK  VA+K I++ + +D    E + RE+   + L HP+II+  +V+ T + L +V EYA  GE+FD + N GR +E E R  F Q++S V+YCH  +I
Sbjct:   29 GNFAVVKLGRHRITKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKI 138          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.513e-17
Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID----ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L RH+ TK  VA+K I++ + +D    E + RE+   + L HP+II+  +V+ T + L +V EYA  GE+FD + N GR +E E R  F Q++S V+YCH  +I
Sbjct:   29 GNFAVVKLGRHRITKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKI 138          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDEN---VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L  H  TK  VA+K +++ +  DEN   + RE+   + LRHP+IIR  +V+ T   + +V EYA+GGE+FD +   GR +E + R  F+Q+++ V +CH   I
Sbjct:   68 GNFAVVKLATHMITKAKVAIKIVDKTQLDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVYFCHCRSI 177          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17
Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDEN---VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L RH+ TK  VA+K I++ R    N   + RE+   + L HP+II+  +V+ T   L IV E+A  GE+FD + + G  SE E R  F Q++S V YCHS  I
Sbjct:   35 GNFAVVKLARHRVTKTQVAIKIIDKTRLDPSNLEKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDHLTSNGHLSESEARKKFWQILSAVEYCHSHHI 144          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17
Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  103 NFGVARLLRHKETKELVAVKYIERGR----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            NFG  R     ET + VA+  +++ +    K+ E + REI   + + HPN+++  EV+ +   + IV+E+ +GG+LFD+I N GR +EDE + +FQQLI+ V+YCHS
Sbjct:   23 NFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPNVVQLYEVLASKAKIYIVLEFISGGKLFDKIKNDGRMNEDEAQRYFQQLINAVDYCHS 129          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID----ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQIC 423
            G F      RH +T + VA+K I++ R +     E + REI   R LRHPNI+   EV+ T + +  VME+  GGELF+++ + G+  ED  R +FQQL+  V++CHS  +C
Sbjct:   21 GTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKV-STGKLREDVARKYFQQLVRAVDFCHSRGVC 131          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.313e-17
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   85 RIWEPGNFGVARLLRHKETKELVAVKYIERGRK----IDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            R+   G FG     +   T E VA+K I + +     + E + REI   R +RHPNI+  KEV+ T T +  +MEY  GGELF +I   G+  ED  R +FQQLIS V++CHS
Sbjct:   47 RLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTKIFFIMEYVKGGELFSKIVK-GKLKEDSARKYFQQLISAVDFCHS 158          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.551e-17
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDEN---VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF V +L RH+ TK  VA+K I++ R    N   + RE+   + L HP+II+  +V+ T   L IV E+A  GE+FD + + G  SE+E R  F Q++S V YCH   I
Sbjct:   36 GNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLEKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHI 145          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.247e-16
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  202 REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            REI N +  RHP+II+  +V+ TP+ + +VMEY +GGELFD IC  GR  E E R  FQQ++SGV+YCH
Sbjct:   24 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 92          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
SIK1_RAT1.924e-1742.73Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]
SIK2_PONAB2.513e-1742.34Serine/threonine-protein kinase SIK2 OS=Pongo abel... [more]
SIK2_HUMAN2.513e-1742.34Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
SIK3_DANRE3.283e-1740.00Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
SIK2_CHICK3.283e-1742.73Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
PP395_ARATH3.283e-1740.19Pentatricopeptide repeat-containing protein At5g21... [more]
CIPKF_ARATH3.283e-1740.18CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKP_ARATH7.313e-1742.48CBL-interacting serine/threonine-protein kinase 25... [more]
SIK1_HUMAN9.551e-1741.82Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
AAPK1_PIG1.247e-1655.075'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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