CK740241

Overview
NameCK740241
Unique NameCK740241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVA---REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF   +L RH  T   VA+K I++ +    ++    RE+   + L HPNI++  EV+ T   L +VMEYA+ GE+FD + + GR  E E R  F+Q++S V+YCH   I
Sbjct:   68 GNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNI 177          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID---ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF   +L RH  T   VA+K I++ +      + + RE+   + L HPNI++  EV+ T   L ++MEYA+GGE+FD +   GR  E E R  F+Q++S V YCH  +I
Sbjct:   65 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRI 174          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID---ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            GNF   +L RH  T   VA+K I++ +      + + RE+   + L HPNI++  EV+ T   L ++MEYA+GGE+FD +   GR  E E R  F+Q++S V YCH  +I
Sbjct:   65 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRI 174          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVA---REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNF   +L RH  T + VAVK I++ +    ++    RE+   + L HPNI++  EV+ T   L +VMEYA+GGE+FD +   GR  E E R  F+Q++S V YCH
Sbjct:   62 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 167          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVA---REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNF   +L RH  T + VAVK I++ +    ++    RE+   + L HPNI++  EV+ T   L +VMEYA+GGE+FD +   GR  E E R  F+Q++S V YCH
Sbjct:   62 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 167          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.740e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKIDENVA---REIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNF   +L RH  T + VAVK I++ +    ++    RE+   + L HPNI++  EV+ T   L +VMEYA+GGE+FD +   GR  E E R  F+Q++S V YCH
Sbjct:   62 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 167          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.191e-16
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID---ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNF   +L RH  T   VAVK I++ +      + + RE+   + L HPNI++  EV+ T   L +VMEYA+GGE+FD +   GR  E E R  F+Q++S V YCH
Sbjct:   69 GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 174          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.191e-16
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:  100 GNFGVARLLRHKETKELVAVKYIERGRKID---ENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCH 408
            GNF   +L RH  T   VAVK I++ +      + + RE+   + L HPNI++  EV+ T   L +VMEYA+GGE+FD +   GR  E E R  F+Q++S V YCH
Sbjct:   69 GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 174          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.191e-16
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   85 RIWEPGNFGVARLLRHKETKELVAVKYIERG-----RKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHS 411
            R+   GNF          T + VA+K I++      R + E + REI   R LRHPN++  +EV+ T   +  VMEY  GGELF+ I   G+  ED  R +FQQLIS V++CHS
Sbjct:   19 RLLGTGNFAKVYHGTEISTGDDVAIKVIKKDHVFKRRGMMEQIEREIAVMRLLRHPNVVELREVMATKKKIFFVMEYVNGGELFEMIDRDGKLPEDLARKYFQQLISAVDFCHS 132          
BLAST of CK740241 vs. ExPASy Swiss-Prot
Match: CIPKE_ARATH (CBL-interacting serine/threonine-protein kinase 14 OS=Arabidopsis thaliana GN=CIPK14 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.191e-16
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  127 RHKETKELVAVKYIERGRK----IDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICNAGRFSEDEGRYFFQQLISGVNYCHSMQI 420
            R   T + VA+K + + R     ++ N+ REI     LRHP+I+R  EV+ T + +  VME+A GGELF ++ + GRF ED  R +FQQLIS V YCHS  I
Sbjct:   40 RSTATGQSVAIKVVSKQRLQKGGLNGNIQREIAIMHRLRHPSIVRLFEVLATKSKIFFVMEFAKGGELFAKV-SKGRFCEDLSRRYFQQLISAVGYCHSRGI 140          
The following BLAST results are available for this feature:
BLAST of CK740241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
MARK4_HUMAN4.740e-1640.00MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
MARK3_RAT4.740e-1640.00MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE4.740e-1640.00MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK2_RAT4.740e-1642.45Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_MOUSE4.740e-1642.45Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
MARK2_HUMAN4.740e-1642.45Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
MARK1_RAT6.191e-1642.45Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE6.191e-1642.45Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
CIPKG_ARATH6.191e-1641.23CBL-interacting serine/threonine-protein kinase 16... [more]
CIPKE_ARATH6.191e-1645.10CBL-interacting serine/threonine-protein kinase 14... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6736 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740241 ID=CK740241; Name=CK740241; organism=Citrus sinensis; type=EST; length=428bp
GGTTGCTCATCAAAGAGAAGATTCAAGAAATTGAATTGGGGTGTTAGAAG
AAAATTAAAAAGATGGAGAAATATGAATTGGTGAAGGATTTGGGAGCCTG
GGAATTTTGGTGTGGCAAGGCTTTTGAGACACAAAGAAACCAAAGAGCTT
GTTGCCGTGAAATACATTGAAAGAGGCCGCAAGATAGACGAGAATGTGGC
TAGAGAGATTATAAATCACAGGTCCCTTAGGCACCCAAATATTATCCGGT
TCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCAATTGTTATGGAATAT
GCTGCCGGCGGAGAGCTGTTTGATCGAATCTGCAATGCCGGTAGATTCAG
TGAAGATGAGGGTAGATATTTTTTCCAGCAGCTGATCTCGGGCGTCAATT
ATTGCCATTCCATGCAAATATGCCCTAG
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