CK740244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPX41_RAT (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 3.107e-25 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*P 331 T+ NYT+L L+ +Y GL ILAFPCNQFG QEPG N++I+EFA + F ++ K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL+DK G VV+ P P Sbjct: 76 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEP 186
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.107e-25 Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*PSEH*EGYKE 358 L +LY+ YK+QGLEIL FPCNQF Q+ G+N +I EF + F +F K+ VNG A PLY+ LK G +IKWNF+KFL+D++G V+E P P E E K+ Sbjct: 44 LEKLYETYKDQGLEILGFPCNQFANQDAGENTEINEFCQLNYGVTFTMFQKIKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDRDGQVIERFAPKTEPEEMEEEIKK 155
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPX4_HYLLA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.300e-25 Identity = 59/112 (52.68%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*P 331 T NYT+L L+ +Y GL LAFPCNQFG QEPG NE+I+EFA + +F +F K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL DK G VV+ P P Sbjct: 76 TEVNYTQLVDLHARYAECGLRFLAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLFDKNGCVVKRYGPMEEP 186
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.921e-25 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*PSE 337 L +LYD+YK+Q IL FPCNQFG QEPG E+ + + FPI +KVDV GDN PL+ L ++ G+ + IKWNF+KFL+D+EGNV++ P P + Sbjct: 45 LQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEEAAQNCKINYGVTFPIHEKVDVKGDNQHPLFHFLTNAAKGMINEKIKWNFTKFLIDREGNVIKRFSPQKKPEQ 149
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*P 331 T NYT+L L+ +Y GL ILAFPCNQFG QEPG + +I+EFA + +F +F K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL+DK G VV+ P P Sbjct: 76 TEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEP 186
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24 Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*P 331 T+ NYT+L L+ +Y GL ILAFPCNQFG QEPG N++I+EFA + +F ++ K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL+DK G V+ P P Sbjct: 132 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCEVKRYGPMEEP 242
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPO_SYNY3 (Putative glutathione peroxidase OS=Synechocystis sp. (strain PCC 6803) GN=slr1171 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.226e-24 Identity = 49/104 (47.12%), Postives = 71/104 (68.27%), Query Frame = 2 Query: 14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLF------GDSIKWNFSKFLVDKEGNVVE 307 Y L LY+++ ++G +L FPCNQFG QEPG + +I+ F TR+ FP+F+KV+VNG NA PL+K L ++ G+ + IKWNF+KFLVD++G VV+ Sbjct: 47 YQGLQALYNRFGDRGFTVLGFPCNQFGQQEPGGSGEIKNFCETRYGVTFPLFEKVEVNGPNAHPLFKFLTAASPGMAIPFLGGAEDIKWNFTKFLVDRQGKVVK 150 HSP 2 Score: 24.6386 bits (52), Expect = 4.226e-24 Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 3 Query: 288 RRGMLLSRYAPTTSPLSIEKDIKKLL 365 R+G ++ RY P I DI+KLL Sbjct: 144 RQGKVVKRYGSIAKPDEIAADIEKLL 169
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: BSAA_STAEQ (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 5 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVEPLCPHH*PSE 337 N + +L LY KY GLEIL+FPCN F QEPG + I +F FPI K++VNG++ PLY LK + GLFG IKWNF+KF+VD++GN+V+ P P++ Sbjct: 38 NDQFNKLEMLYKKYHKYGLEILSFPCNDFNNQEPGLIKDIYRVYKYKFGITFPIHAKINVNGEHEHPLYTLLKCKQPGLFGSQIKWNFTKFVVDQQGNIVKRFLPCDNPNQ 148
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPX1_SCHMA (Glutathione peroxidase OS=Schistosoma mansoni GN=GPX1 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 9.995e-24 Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVEPLCP 319 T+ NY +L +++ + +GL ILAFPCNQFG QEP +I++F ++ +F +F K+ VNG +A LYK LKS + G ++IKWNFSKFLVD++G V+ P Sbjct: 46 TDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP 151
BLAST of CK740244 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMF (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gpxA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 56/128 (43.75%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSK-----GGLFGD---------------SIKWNFSKFLVDKEGNVVEPLCPHH*PSE 337 Y L +LY +Y +GLEIL FPCNQF Q P + +I + +F +F IFDK++VNG N APLY +LKS K LF D IKWNF+KFLV+++G VVE P P E Sbjct: 41 YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERFAPSVTPEE 168 The following BLAST results are available for this feature:
BLAST of CK740244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740244 ID=CK740244; Name=CK740244; organism=Citrus sinensis; type=EST; length=396bpback to top |