CK740249

Overview
NameCK740249
Unique NameCK740249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_STAAR (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=gluD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46
Identity = 90/224 (40.18%), Postives = 135/224 (60.27%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            +T LGV  A E         I   K  IQGFGN GS+ AKF ++ G K+V +SD  GA+ +PNG+DI              +      +   +L   +CD+LVP A+   + ++NA D+KA  ++EAAN PT PEA  IL+++G++++PD+ A++GGVTVSYFEWVQN QG+ W EE+VN +L+  + +AF  I  + Q    ++R+ A+ +G+ R A+A   R
Sbjct:  189 STALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE-ETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYR 411          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_STAAN (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=gluD PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46
Identity = 90/224 (40.18%), Postives = 135/224 (60.27%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            +T LGV  A E         I   K  IQGFGN GS+ AKF ++ G K+V +SD  GA+ +PNG+DI              +      +   +L   +CD+LVP A+   + ++NA D+KA  ++EAAN PT PEA  IL+++G++++PD+ A++GGVTVSYFEWVQN QG+ W EE+VN +L+  + +AF  I  + Q    ++R+ A+ +G+ R A+A   R
Sbjct:  189 STALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE-ETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYR 411          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_STAAM (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46
Identity = 90/224 (40.18%), Postives = 135/224 (60.27%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            +T LGV  A E         I   K  IQGFGN GS+ AKF ++ G K+V +SD  GA+ +PNG+DI              +      +   +L   +CD+LVP A+   + ++NA D+KA  ++EAAN PT PEA  IL+++G++++PD+ A++GGVTVSYFEWVQN QG+ W EE+VN +L+  + +AF  I  + Q    ++R+ A+ +G+ R A+A   R
Sbjct:  189 STALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE-ETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYR 411          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_STAAC (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=gluD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46
Identity = 90/224 (40.18%), Postives = 135/224 (60.27%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            +T LGV  A E         I   K  IQGFGN GS+ AKF ++ G K+V +SD  GA+ +PNG+DI              +      +   +L   +CD+LVP A+   + ++NA D+KA  ++EAAN PT PEA  IL+++G++++PD+ A++GGVTVSYFEWVQN QG+ W EE+VN +L+  + +AF  I  + Q    ++R+ A+ +G+ R A+A   R
Sbjct:  189 STALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE-ETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYR 411          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_BACSU (NAD-specific glutamate dehydrogenase OS=Bacillus subtilis GN=rocG PE=1 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46
Identity = 89/224 (39.73%), Postives = 139/224 (62.05%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            AT  GV    E  + + G  + N +  IQGFGN GS+ AKF H+ G KV+ +SD  G + NP+G+DIP             +    + +   +LL  +CD+LVP A+   +  +NA +++A  ++EAAN PT  +A +IL+++GV+++PDI A++GGVTVSYFEWVQN QG+ W EE+V  +L+  M+S+F+ I     TH  ++R+ A+  G+ + A+A+  R
Sbjct:  199 ATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFT-DVITNEELLEKDCDILVPAAISNQITAKNAHNIQASIVVEAANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVDMRLAAYMTGIRKSAEASRFR 421          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE3_THEMA (Glutamate dehydrogenase OS=Thermotoga maritima GN=gdhA PE=1 SV=4)

HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45
Identity = 96/225 (42.67%), Postives = 134/225 (59.56%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFF-HEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            ATG GV       +   G        A+QGFGNVG +AA     E G KVVAVSD  G I NP G D+               +  G  +   +LL  + D+LVP AL G ++  NA  +KAK ++E AN PT PEADEILS++G++++PDI AN+GGVTVSYFEWVQ++Q F W+ ++V + L++ M  AF D+  + + +N ++R  A+ L ++RVA AT  R
Sbjct:  188 ATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNVDMRTAAYILAIDRVAYATKKR 412          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: GUDB_BACSU (NAD-specific glutamate dehydrogenase OS=Bacillus subtilis GN=gudB PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.574e-43
Identity = 86/225 (38.22%), Postives = 134/225 (59.56%), Query Frame = 2
Query:    2 AATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            +AT  GV    +    + G  I   +  +QGFGN GS+ AKF H+ G KVV +SD  G + +P G+DI                      +  +LL  +CD+LVP A+   + +ENA +++AK ++EAAN PT  E  +ILS + ++++PD+ A++GGVTVSYFEWVQN QGF W EE+V  +L++ M+ +F +I  M      ++R+ A+ +GV ++A+A+  R
Sbjct:  201 SATAKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLAKFMHDAGAKVVGISDAYGGLYDPEGLDIDYLLDRRDSFGTVTKLFNDTITN-QELLELDCDILVPAAIENQITEENAHNIRAKIVVEAANGPTTLEGTKILSDRDILLVPDVLASAGGVTVSYFEWVQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRIDMRLAAYMVGVRKMAEASRFR 424          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE3_THELI (Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 94/221 (42.53%), Postives = 124/221 (56.11%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFF-HEHGGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQA 664
            AT  G  +         G  +     AIQG+GN G + AK    E+G KVVAVSD  G I NP+G++               DF G   +   +LL  E DVL P A+  V+ K+NA ++KAK + E AN PT PEADEIL +KG++I+PD   N+GGVTVSYFEWVQNI G  W  E+   +L + M  AF D+    +  N N+R  A+ + V+RV QA
Sbjct:  190 ATARGASYTVREAAKALGMDLKGKTIAIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYNPDGLNADEVLAWKKKTGSVKDFPGATNITNEELLELEVDVLAPSAIEEVITKKNADNIKAKIVAELANGPTTPEADEILYEKGILIIPDFLCNAGGVTVSYFEWVQNITGDYWTVEETRAKLDKKMTKAFWDVYNTHKEKNINMRDAAYVVAVSRVYQA 410          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE3_THEPR (Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 91/221 (41.18%), Postives = 124/221 (56.11%), Query Frame = 2
Query:    5 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQA 664
            AT  G  F         G  +   K A+QG+GN G + AK   E  G  VVAVSD  G I NP+G+D               DF G   +   +LL  E DVL P A+  V+ ++NA ++KAK + E AN P  PEAD+IL +KG++ +PD   N+GGVTVSYFEWVQNI G+ W EE+V  +L + M  AF ++    +  N ++R  A+ + V+RV QA
Sbjct:  190 ATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANGPVTPEADDILREKGILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHMRDAAYVVAVSRVYQA 410          
BLAST of CK740249 vs. ExPASy Swiss-Prot
Match: DHE2_CLODI (NAD-specific glutamate dehydrogenase OS=Clostridium difficile GN=gluD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41
Identity = 90/230 (39.13%), Postives = 131/230 (56.96%), Query Frame = 2
Query:    2 AATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAV-----SDITGAIKNPNGIDIPAXXXXXXXXXXXXDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKAMCQTHNCNLRMGAFTLGVNRVAQATLLR 676
            AATG GV        A+ G  +   K A+QG GNVGS+      + GG VVA+     S+ + AI N NG+D  A            +F G   + L +    + D+++P AL   + KE A  +KAK + EAAN PT PEADE+ +++G+V+ PDI  N+GGVTVSYFEWVQN+ G+ W EE+V  + +  M+ AF+ I  + + +N  +R  A+   + +VA+A  LR
Sbjct:  189 AATGFGVAVTAREAAAKLGIDMKKAKIAVQGIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNLLNFPGAKRISLEEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPTTPEADEVFAERGIVLTPDILTNAGGVTVSYFEWVQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIKEEYNVTMREAAYMHSIKKVAEAMKLR 418          
The following BLAST results are available for this feature:
BLAST of CK740249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
DHE2_STAAR1.521e-4640.18NAD-specific glutamate dehydrogenase OS=Staphyloco... [more]
DHE2_STAAN1.521e-4640.18NAD-specific glutamate dehydrogenase OS=Staphyloco... [more]
DHE2_STAAM1.521e-4640.18NAD-specific glutamate dehydrogenase OS=Staphyloco... [more]
DHE2_STAAC1.521e-4640.18NAD-specific glutamate dehydrogenase OS=Staphyloco... [more]
DHE2_BACSU7.548e-4639.73NAD-specific glutamate dehydrogenase OS=Bacillus s... [more]
DHE3_THEMA3.746e-4542.67Glutamate dehydrogenase OS=Thermotoga maritima GN=... [more]
GUDB_BACSU1.574e-4338.22NAD-specific glutamate dehydrogenase OS=Bacillus s... [more]
DHE3_THELI6.612e-4242.53Glutamate dehydrogenase OS=Thermococcus litoralis ... [more]
DHE3_THEPR3.281e-4141.18Glutamate dehydrogenase OS=Thermococcus profundus ... [more]
DHE2_CLODI4.286e-4139.13NAD-specific glutamate dehydrogenase OS=Clostridiu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6744 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740249 ID=CK740249; Name=CK740249; organism=Citrus sinensis; type=EST; length=677bp
AGCTGCTACTGGACTTGGAGTGTTCTTTGCAACCGAGGCTTTACTGGCTG
AACATGGAAAATCAATTTCCAATATGAAATTTGCTATCCAGGGTTTTGGA
AATGTGGGCTCCTGGGCAGCAAAATTTTTCCATGAGCATGGGGGAAAGGT
TGTTGCAGTCAGTGACATCACAGGTGCAATTAAGAATCCTAATGGTATTG
ATATTCCAGCTCTGCTAAAATACAAGAAGAGCAATAAAAGCCTGAATGAT
TTTCAAGGTGGAAATGCAATGGATTTAAATGACTTACTTGTCCATGAATG
CGATGTTCTTGTGCCATGTGCATTAGGTGGAGTCCTCAACAAGGAAAATG
CTGCAGATGTGAAGGCAAAGTTCATAATTGAAGCAGCCAATCACCCAACT
GACCCTGAAGCAGACGAGATTTTGTCCAAGAAGGGGGTTGTTATACTCCC
TGACATATATGCAAATTCAGGTGGTGTGACAGTGAGTTATTTTGAATGGG
TTCAGAACATTCAAGGATTCATGTGGGAAGAAGAGAAGGTTAATCATGAG
CTTAAGAGGTACATGATGAGTGCTTTCAAGGACATTAAGGCAATGTGCCA
AACTCACAACTGCAACTTGCGCATGGGTGCCTTCACTCTTGGGGTGAACC
GGGTTGCACAAGCTACTCTGTTGAGAG
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