CK740254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KE+K GRLAML+ GF QAI TG+GPLENLA H+ADP + N ++ T+ Sbjct: 189 YPGGS-FDPLGLA-DDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATN 260
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.517e-12 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE ++ KE+KNGRLAM + GF QAI TG+GPLENLA H+ADP + N ++ T+ Sbjct: 189 YPGGT-FDPLGLA-DDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.243e-11 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ P+ L+ KEIKNGRLAM + GF QAI TG+GP+ENLA H+ADP + N ++ T+ Sbjct: 202 YPGGN-FDPLGLA-DDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATN 273
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.243e-11 Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KE+KNGRLAM + GF AI TG+GPLENLA H+ADP + N +S T+ Sbjct: 152 YPGGS-FDPLGLAE-VPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATN 223
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.623e-11 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KEIKNGRLAM + GF QAI TG+GPL+NL H+ADP + N ++ T+ Sbjct: 191 YPGGS-FDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATN 262
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.623e-11 Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KEIKNGRLAM + GF QAI TG+GP+ENL HVADP N ++ T+ Sbjct: 189 YPGGA-FDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATN 260
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.675e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KEIKNGRLAM + GF QAI TG+GP+ENL+ H+ DP N ++ T+ Sbjct: 189 YPGGA-FDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATN 260 HSP 2 Score: 20.7866 bits (42), Expect = 1.675e-11 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 8 LFVVQLALMGWVEGRR 55 ++ Q+ LMG+VEG R Sbjct: 160 IWACQVVLMGFVEGYR 175
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.120e-11 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KE+KNGRLAM + GF QAI TG+GP+ENL+ H+ADP N ++ T+ Sbjct: 189 YPGGS-FDPLGLA-DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATN 260
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.120e-11 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ + E L+ KEIKNGRLAM + GF QAI TG+GPLENLA H+ADP + N ++ T+ Sbjct: 188 YPGGS-FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 259
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.120e-11 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ P+ L+ KEIKNGRLAM + GF QAI TG+GPLE+LA H+ADP + N + T+ Sbjct: 190 YPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATN 261 The following BLAST results are available for this feature:
BLAST of CK740254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740254 ID=CK740254; Name=CK740254; organism=Citrus sinensis; type=EST; length=527bpback to top |