CK740254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.769e-11 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ PE L+ KE+KNGRLAM + GF QAI TG+GPLENLA H+A P + N ++ T+ Sbjct: 187 YPGGS-FDPLGLA-DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATN 258
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 2.820e-11 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFT 356 YPG FDP+ P+ L+ KEIKNGRLAM A +GF QAI TG+GP+ENL H+A+P N F+ T Sbjct: 198 YPGEA-FDPLGLA-DDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYAT 268 HSP 2 Score: 20.4014 bits (41), Expect = 2.820e-11 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 17 VQLALMGWVEGRR 55 VQ+ LMG VEG R Sbjct: 172 VQVVLMGLVEGYR 184
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 2.823e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ P+ L+ KEIKNGRLAM + GF QAI TG+GP+ENL H+ADP N ++ T+ Sbjct: 189 YPGGA-FDPLGLA-DDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATN 260 HSP 2 Score: 20.7866 bits (42), Expect = 2.823e-11 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 8 LFVVQLALMGWVEGRR 55 ++ Q+ LMG+VEG R Sbjct: 160 IWACQVVLMGFVEGYR 175
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.616e-11 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG +FDP+ P L+ EIK+ RLAM+ F+GF QA TG+GPL N A H++DP H + F+S Sbjct: 214 YPGGKFFDPLGLA-SDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.616e-11 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ P+ ++ KEIKNGRLAM + GF QAI TG+GP+ENLA H+ADP + N ++ T+ Sbjct: 202 YPGGN-FDPLGLA-DDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATN 273
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.665e-11 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 YPGG FDP+ P+ L+ KE+KNGRLAM + GF QAI TG+GP++NL HVADP N ++ T+ Sbjct: 189 YPGGA-FDPLGLA-DDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATN 260 HSP 2 Score: 21.1718 bits (43), Expect = 3.665e-11 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 8 LFVVQLALMGWVEGRR 55 ++ Q+ LMG+VEG R Sbjct: 160 IWATQVVLMGFVEGYR 175
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.723e-11 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADPGHCNVFSAFTS 359 Y GG FDP+ G PE L+ KEIKNGRLAM + GF QAI TG+GP+ENLA H+ DP + N ++ T+ Sbjct: 188 YLGGS-FDPLGLG-DDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATN 259
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.723e-11 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADP 326 +PGG FDP+ + PE +L+ KEIKNGRLAM A +GF QA TG+GP+ENLA H++DP Sbjct: 201 HPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
BLAST of CK740254 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.723e-11 Identity = 35/63 (55.56%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 138 YPGGIWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGQGPLENLACHVADP 326 YPGG +FDP+ P L+ KEIKNGRLAM + GF QAI TG+GPLENL H+ DP Sbjct: 191 YPGGQYFDPLGLA-DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDP 252 The following BLAST results are available for this feature:
BLAST of CK740254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740254 ID=CK740254; Name=CK740254; organism=Citrus sinensis; type=EST; length=527bpback to top |