CK740261

Overview
NameCK740261
Unique NameCK740261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:462..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 57/199 (28.64%), Postives = 96/199 (48.24%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK---MAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VV  GG    +  GR DGR S+A  +   LP  +DS++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +CP           V  D G+    D ++ R +  ++ ++  D  L  D  TR  +++   + +    F  EF +++  +S     TG+ GEIR+VC+  N
Sbjct:  140 VVLTGGQRWEVPLGRLDGRISQASDVN--LPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ-----NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 52/192 (27.08%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDG-RKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            V+ +GG    +K GRRD    S +      LP    ++  ++  F A G+    +VAL G+H++G+  CV    R+Y   +  L+          CP A         + + R TP   D +Y+  +++++GL+  D  L     T   V   ++S   F+++F  A+  + + +PLTG+ G+IR+ C   N
Sbjct:  137 VLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTNIDLS--FALSRRRSCPAATGSGDNNAAILDLR-TPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 52/183 (28.42%), Postives = 92/183 (50.27%), Query Frame = 2
Query:   35 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTK-GEIRKVC 565
            + TGR DG+ S A +++  LP    +++    +F    +    +V LLG H++G THC  ++ RLY      + DP+++P  V  +  KCP +      +   +N   +   +D ++Y+ I  ++G++ +D +LA D  T   V  +A   D F   F +A+  L     ++  K GEIR+ C
Sbjct:  143 IPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSS-NTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMVTDIANGND-FLVRFGQAMVNLGSVRVISKPKDGEIRRSC 321          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 50/178 (28.09%), Postives = 83/178 (46.63%), Query Frame = 2
Query:   44 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GR+D R +        L   N++++  L +FAA G +   +VALLGSH++G   C  L       +   +NP  V  +   C   +    A   V  D  TP   D  Y+ ++++++GL+  D++L     T   V++   +   F  +F+ A+  +S   P  G   EIR VC+  N
Sbjct:  180 GRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLC------ISTFINPARVSTLNCNCSGTV---NATGLVGLDP-TPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLPPSPGVALEIRDVCSRVN 347          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL    D +L+      +   C       +     RND       DN Y+  +    G++  D  L    RTR  V   A +Q  FF +F +A+  +S  +   G++GE+R+ C   N
Sbjct:  136 GGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVP-DSSLDSTFANTLSKTCSAGDNAEQPFDATRND------FDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGSQGEVRQNCRSIN 314          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            V  LGG    +  GR D R +        LP   D+++V +++F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP + D  YY N+  N+G+M  D  L  D  T  +V   +   + F  +F+ A+  + +  P  G + EIR VC+  N
Sbjct:  179 VAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQLDT----TPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 357          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 49/188 (26.06%), Postives = 81/188 (43.09%), Query Frame = 2
Query:   14 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            LGG    +  GR D   +        LP  +D+++V +++F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP V D  YY N+ +N+G+M  D  L  +  T  +V   + +   F ++F+ A+  +    P  G + EIR VC+  N
Sbjct:  181 LGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQLDT----TPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVN 356          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 51/191 (26.70%), Postives = 80/191 (41.88%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            V  LGG    +  GR D R +        LP   D+++V +++F         +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP + D  YY N+ +N+G+M  D  L  D  T  +V   +     F  +F+ A+  + +  P  G + EIR VC+  N
Sbjct:  178 VAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQLDT----TPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 356          
The following BLAST results are available for this feature:
BLAST of CK740261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER69_ARATH1.334e-1328.64Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER68_ARATH1.334e-1327.08Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER60_ARATH2.972e-1328.42Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PERA_IPOBA5.070e-1328.09Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER47_ARATH1.927e-1228.34Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER1_SOLLC9.562e-1226.70Suberization-associated anionic peroxidase 1 OS=So... [more]
PER2_SOLLC3.633e-1126.06Suberization-associated anionic peroxidase 2 OS=So... [more]
PERX_SOLTU4.745e-1126.70Suberization-associated anionic peroxidase OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740261 ID=CK740261; Name=CK740261; organism=Citrus sinensis; type=EST; length=686bp
TGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAA
GAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGAT
CACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCAT
TGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAA
CTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCA
CTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAAT
CCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCA
TGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTG
ATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGT
TAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAG
CCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAG
ATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
AGCTAACAGCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTC
CTTGTTTCTTCTATGAGGAAGAAAGAGTGTGAGATG
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