CK740261

Overview
NameCK740261
Unique NameCK740261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:462..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 59/186 (31.72%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    8 VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  136 VAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 59/186 (31.72%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    8 VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  136 VAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 59/191 (30.89%), Postives = 91/191 (47.64%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  127 VVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 60/191 (31.41%), Postives = 89/191 (46.60%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGGP   +  GRRD   + A +    LP  + S S +   F    ++   +VAL G+H++G+  C     R+Y   D  +N      +   CP +  +         D  TP   DN YY N+L  KGL+  D  L  ++ T   V+  A +   F   F+ A+  +    PLTGT+G+IR  C+  N
Sbjct:  125 VVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGG-DTNINTAFATSLKANCPQSGGNTNLANL---DTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSKVN 311          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 65/200 (32.50%), Postives = 101/200 (50.50%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDY----FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVA  G    + TGRRDGR SRA      LP   DS+ +   +F   G++   LVAL G+H++G   C  +  RL+        DP+++   +P +   CP    +  A + V  D G+    D +Y+ N+ + +G++  D +L TD  T+ +V++    +      F  EF R++  +S     TGT GEIRKVC+  N
Sbjct:  135 VVATRGLTWSVPTGRRDGRVSRAADAGD-LPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQ---NGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 61/188 (32.45%), Postives = 88/188 (46.81%), Query Frame = 2
Query:    2 GVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            GVVALGGP   +  GRRD   S        LP    S+  +L  ++   +DA  +VAL G+H++G+  C      +Y + +  +N      +   CP +     A      D  TP V  N+YY+N+L  KGL+  D +L  +  T   V   A S   F   F+ A+  +    PLTGT G+IR  C
Sbjct:  135 GVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDTN--INAAFATSLKANCPMSGGSSLAPL----DTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTC 315          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 59/191 (30.89%), Postives = 91/191 (47.64%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  127 VVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            +VA+GGP   + TGRRDGR S        +P    + + ++  F   G+D   LV L G+H++G +HC    +RL+      + DP+L+ ++  ++  +   +I D      V  D G+    D +YYR +L  +GL   D  L  +      VK+ A  S+  FF EFS ++  +      TG+ GEIR+ C   N
Sbjct:  132 IVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIAD--NTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 68/209 (32.54%), Postives = 100/209 (47.85%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 589
            V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  139 VTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 2
Query:   11 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y      ++         +CP    +         D  TP   DNNY++N++  KGL+  D  L     T   V + + S   F  +F+ A+  + + +PL+G  G IRKVC   N
Sbjct:  138 AVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSN-GTDIDAGFASTRRRQCPQEGENGNLAPL---DLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
The following BLAST results are available for this feature:
BLAST of CK740261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_ZINEL4.734e-1931.72Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL4.734e-1931.72Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER2_ORYSJ6.183e-1930.89Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_WHEAT6.183e-1931.41Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PERN1_TOBAC8.076e-1932.50Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER42_MAIZE8.076e-1932.45Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER2_ORYSI1.055e-1830.89Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER39_ARATH1.378e-1830.96Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1A_ARMRU1.378e-1832.54Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PERX_NICSY1.799e-1829.63Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740261 ID=CK740261; Name=CK740261; organism=Citrus sinensis; type=EST; length=686bp
TGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAA
GAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGAT
CACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCAT
TGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAA
CTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCA
CTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAAT
CCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCA
TGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTG
ATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGT
TAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAG
CCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAG
ATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
AGCTAACAGCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTC
CTTGTTTCTTCTATGAGGAAGAAAGAGTGTGAGATG
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