CK740261

Overview
NameCK740261
Unique NameCK740261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:462..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL 514
            V   GGPY  +  GR+DG  SRA      LP    ++S +++ FAA G+    +V L G H++G +HC     RL     + ++DP++N      +  KCP      K    V +   T  V DN YY+ IL  KG+   D  L  D RT+  V+  A+ Q  FF+EF+ ++  L
Sbjct:  132 VTLSGGPYWSVLKGRKDGTISRANETRN-LPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDS--TSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKL 303          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 62/197 (31.47%), Postives = 93/197 (47.21%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNPDH---VPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P     PA + D+   +  +   C    P   +V   + D  TP   DN YY N+L  +GL+  D  LA  D  TR  V+  A  Q  FF++F  A  ++       G+  EIRK C + N
Sbjct:  157 VVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGP---SVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNA--MVKMGGIPGGSNSEIRKNCRMIN 348          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18
Identity = 64/196 (32.65%), Postives = 98/196 (50.00%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP-DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP+ P+  GR DGR S A  +   LP   DS++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +CP +  P  + V     D G+    D +Y  N+ + +GL+  D  L T+  TRP V+++   +  F     EF+R++T +S+    TG  GEIR+VC+  N
Sbjct:  141 GGPWWPVPLGRLDGRISLASNV--ILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVL----DTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18
Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL G+H+ GR  C     RL+        DP LN  ++  +   CP              D  TP   DNNY+ N+  N+GL+  D +L   +   T   V   + +Q  FF+ F +++  +   +PLTG+ GEIR  C   N
Sbjct:  137 GGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQG---GSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 57/198 (28.79%), Postives = 98/198 (49.49%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPH-------MLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM---AKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+  P ++     D           +  +C D+  D +       D  TP   DN+Y+ N+L+ +GL++ D+ L ++       +K+   A +QD FF +F  ++  +   N LTG +GEIR+ C   N
Sbjct:  141 GGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPL---DIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 59/188 (31.38%), Postives = 87/188 (46.28%), Query Frame = 2
Query:    2 GVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            GVVALGGP   +  GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y + +  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L     T   V+  A S   F   F+ A+  +   +P TGT+G+IR+ C
Sbjct:  135 GVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN--INSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 57/192 (29.69%), Postives = 92/192 (47.92%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY        DP L+P +   +  +CP    +   V  V  +  +P + D  YY ++L N+GL   D  L TD  T   V++ A +   +  +F+ A+  + +   L G  G+IR  C + N
Sbjct:  172 GGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLV--VPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVIN 361          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   20 GPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF-----KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GP   + TGRRDGR S   + +  +P+ +DS+ ++  +F   G++A  LV L  +H++G T C  +  RLY      + DP +NP  +P +  +CP    +      +  DR +  + D    +NI D   ++  D  L  D  TR  V       + FF      +F +AI  + +    TG KGEIR+VC+  N
Sbjct:  135 GPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQ---NGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 58/190 (30.53%), Postives = 89/190 (46.84%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP   ++ GRRD R++  +     LP   ++++ +  +F  + +D+  LVAL G+H+ G++ C     RL     D  LNP +   +   C           +V  D  TP   D NYY N+  N G +  D  L     + T   V   A SQ+ FF+ F +++  +    PLTG +GEIR  C   N
Sbjct:  108 GGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSG-----RDTFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17
Identity = 58/191 (30.37%), Postives = 89/191 (46.60%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y + +  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL     T   V+  A +   F ++F+ A+  +   +PLTGT+G+IR+ C+  N
Sbjct:  134 VVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTN--VNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
The following BLAST results are available for this feature:
BLAST of CK740261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER66_ARATH2.350e-1833.71Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER40_ARATH2.350e-1831.47Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER70_ARATH3.069e-1832.65Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER15_IPOBA3.069e-1829.90Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER20_ARATH4.008e-1828.79Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER66_MAIZE6.836e-1831.38Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER5_VITVI6.836e-1829.69Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER43_ARATH1.166e-1730.61Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER2_CUCSA1.166e-1730.53Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER70_MAIZE1.523e-1730.37Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740261 ID=CK740261; Name=CK740261; organism=Citrus sinensis; type=EST; length=686bp
TGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAA
GAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGAT
CACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCAT
TGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAA
CTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCA
CTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAAT
CCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCA
TGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTG
ATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGT
TAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAG
CCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAG
ATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
AGCTAACAGCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTC
CTTGTTTCTTCTATGAGGAAGAAAGAGTGTGAGATG
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