CK740261

Overview
NameCK740261
Unique NameCK740261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17
Identity = 55/194 (28.35%), Postives = 92/194 (47.42%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK  +++   F ++F+ ++  +     +TG+ G IR  C
Sbjct:  155 VVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 59/194 (30.41%), Postives = 89/194 (45.88%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK--RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G   C     RLY      + D  L   +   +   CP    D         D  +P   DN Y++ +L  KGL+  D  L T    +T   VK  A+ +  FF++F++++  +    PLTG  GEIRK C++ N
Sbjct:  156 GGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPL---DLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 63/192 (32.81%), Postives = 87/192 (45.31%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            V   GGP   + TGRRDG +S    +   LP     +S  ++ FAA G++   +V L+G  HSVG  HC     RL    D A+ P     +  KC     DP        D+ T   +DN  Y  I   +G++ +D  L  D+ T   V   A S   F K F+ A+  +     LTG  GEIR+ C + N
Sbjct:  128 VALAGGPRFSVPTGRRDGLRSNPNDVN--LPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRLS---DRAMEPSLKSSLRRKCSSP-NDPTTFL----DQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 60/200 (30.00%), Postives = 93/200 (46.50%), Query Frame = 2
Query:    2 GVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD------HVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GVV   GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD       +  +   CP          +   D  TP   DN+Y+ N+  N+GL+  D +L   +   T   V + A SQ  FF +F  ++  L   +PLTGT G+IR  C   N
Sbjct:  128 GVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPDLTVDATFLQTLQGICPQG--GNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 57/196 (29.08%), Postives = 95/196 (48.47%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAK-SQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 574
            VVA GGP   + TGRRDGR S        +P    + + +   F   G++   LV L G+H++G +HC  +  RLY      + DP+L+  +  ++      ++ D   +  +  D G+    D +YYR +L  +GL   D  L T+  T   +  +   S+  FFK F++++  +      TG+ G IR  C++A
Sbjct:  134 VVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTI--LEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSVA 327          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 54/199 (27.14%), Postives = 100/199 (50.25%), Query Frame = 2
Query:    8 VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNP---DHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK---RTRPYVKKMAKSQDYFFKEFSRAITLLSE-NNPLTGTKGEIRKVCNLAN 577
            + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y   +V  ALNP    ++  +   CP +  +  +      D  TP + DN+ Y  +L  +GL+  D ++ T     +TR  V K A+    FF++FS+++  +    N  +   GE+R+ C   N
Sbjct:  138 ILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDS-NVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17
Identity = 58/191 (30.37%), Postives = 86/191 (45.03%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct:  131 VVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  128 VLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+         DP+++P     + + C  A+P   A    ++   TP+  DN ++  I + KG++++D  +A+D  T   V + A + + F ++F+ A+  +   + LTG+ GEIR  C   N
Sbjct:  133 GGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTC--AVPGGFAA-LDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 59/186 (31.72%), Postives = 88/186 (47.31%), Query Frame = 2
Query:   41 TGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT--GTKGEIRKVCNLAN 577
            TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D          V  D   P+  D+ Y+ ++L NKGL   D  L TD  +  ++  + ++   F  +F R++  +S    LT     GEIRK C L N
Sbjct:  166 TGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP-SAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
The following BLAST results are available for this feature:
BLAST of CK740261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER10_ARATH1.523e-1728.35Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER9_ARATH2.598e-1730.41Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER44_ARATH3.393e-1732.81Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PERX_TOBAC4.431e-1730.00Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER30_ARATH4.431e-1729.08Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER11_ARATH5.787e-1727.14Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER1_ARAHY9.872e-1730.37Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER67_ARATH1.289e-1629.17Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER28_ARATH1.289e-1631.25Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER24_ARATH1.289e-1631.72Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740261 ID=CK740261; Name=CK740261; organism=Citrus sinensis; type=EST; length=686bp
TGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAA
GAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGAT
CACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCAT
TGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAA
CTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCA
CTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAAT
CCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCA
TGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTG
ATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGT
TAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAG
CCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAG
ATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
AGCTAACAGCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTC
CTTGTTTCTTCTATGAGGAAGAAAGAGTGTGAGATG
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